Gene Dfer_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3272 
Symbol 
ID8226850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4011359 
End bp4012477 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content54% 
IMG OID644931104 
ProductDNA polymerase III gamma/tau subunit 
Protein accessionYP_003087649 
Protein GI255037028 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTTTCA GAGATATTCC GGGACTTGAA AATATCAAAT CGACGCTCCG GCGCTCGGTC 
CGGAACAGCC ATTTGGCCCA TGCGCAGTTG TTCGACTACC CTGCCGGCGG GGCTGGCCTG
GCCATGGCGC TCGCATTCTC TACCTACATC AACTGCGAAA ACCGGAATGA TGACGACGCC
TGCGGCACCT GCGCCTCCTG CGTGAAAATG AGCAAGCTCG TCCACCCCGA TTTTCACTTT
ATATTCCCCA TCGCCACTTC CAAGAAGGTG GATGGCAAAA ACAGCGAGGC ATTCCTGCCA
CTTTGCCGCT CGTTTTTGCT GGATAACCCC TACCGCGTCC TCCCCGACTG GCTCGACCAC
ATTGGCGCGG ATAACAAGCA GGGCAACATT TCGGTGGAAG AAGCGCGCGG GATTTTGCGC
AAATTGTCCG TGAAAGCCTA TGAAGGCGAA TACAAAATCC TGCTCATCTG GAAGCCCGAT
ATCATGAACG CGGCCTCTTC CAATGCAATC CTGAAAATTC TGGAAGAGCC GCCTGAAAAG
ACATTGTTCC TCCTCGTAAG CGACCAGTCC GACAAATTGC TCACCACCAT CATCTCCCGC
ACGCAGCGCA TTACCATTCC GGCATTCAGC GATTCGGAAA TCAAATCCTA CCTGAAACAG
CAGGAAGTGA GCGACGCGGT GGCCAATCAG GTCGCATTTC TGTCCGACGG CAACATGGCT
GAGGCATTGA AACTCGTTCA GGAAGAGCAG GATGACCGCT CGGCGTGGTT CGCCGACTGG
ATGCGGTCGT CCTACAAATT CGACGTGGCG CATCTGGTGA AACTTGCCGA TAGCTACGAC
GTGATGAGTA AGGAAAAGCA AAAAGGCCTG CTTGAATATG CATTGCGGCT GTTCAGGGAT
ATGCTTGTAT GGAGCCACGG CGCTGGCGAG CTTTTGCGCG TTCCGCAGGA AGAGCTTACA
TTCGTGCAGA ATTTTTCCAA AACCGTCAAT TTTGAATCGC TGGAAAGGAT GATCGGGGAA
GTGAATACGG CCTATTACCA CATTGAGCGC AATGTGCGGG CCAAAATGGT GTTTCTGGAC
CTGTCGCTAA CGGTCGGCCA GTTTTTCCAG CGCCGATGA
 
Protein sequence
MLFRDIPGLE NIKSTLRRSV RNSHLAHAQL FDYPAGGAGL AMALAFSTYI NCENRNDDDA 
CGTCASCVKM SKLVHPDFHF IFPIATSKKV DGKNSEAFLP LCRSFLLDNP YRVLPDWLDH
IGADNKQGNI SVEEARGILR KLSVKAYEGE YKILLIWKPD IMNAASSNAI LKILEEPPEK
TLFLLVSDQS DKLLTTIISR TQRITIPAFS DSEIKSYLKQ QEVSDAVANQ VAFLSDGNMA
EALKLVQEEQ DDRSAWFADW MRSSYKFDVA HLVKLADSYD VMSKEKQKGL LEYALRLFRD
MLVWSHGAGE LLRVPQEELT FVQNFSKTVN FESLERMIGE VNTAYYHIER NVRAKMVFLD
LSLTVGQFFQ RR