Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3266 |
Symbol | |
ID | 8226841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3999603 |
End bp | 4000625 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644931095 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003087643 |
Protein GI | 255037022 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.030441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAA GAATAACCAC GATTAAAGAC ATTGCCAAAG CACTCGGTAT ATCGGTTGCG ACCGTCTCGC GCGCGATGCG GGACACGTAC GATGTAAGCG CCGAAACGCG TAAACTGGTG CTCGATACCG CGGCGAAAAT GAATTACCGG CCCAATTTCA ATGCAACGGG GCTGGTCAGA AGCGGCACAC ACAAAATCGC GGTGATCATT CCGGCGATCA CCAACTACTA TTTTTCAACA GTGATCACGG GTATTCAGGA ATATGCGTTG GAGCAGAACT ACCAGGTCAT GTTGTATCTG ACCAACGATT CGGCCTATTG GGAGAATAAA GTGGTACGTG AACTCTCGCT GAGCAGCGTC GACGGCCTGC TGGCGTGCAT CACTTATGAA ACGACCGATT TCAGTCATTT TGAAGAGCTG GTTGAAGCGG ACATACCCCT GGTTTTTTTC GATCGCGTGC CCGAGTCCGT TACAACGTCG GTAGTCGTTC AGGACGATTA TACGGGCGCC TGCATGGCTA CCGAGCATCT TATTTCACAG GGCTATTCCA AAATAGCCCA CCTCGCCGGC CCCTGCGGCC TGGACCTGAC CCAGCAACGA CTGCAAGGAT ACCTAGACAC TTTGAAAAAG CACAATCTCG AATCCTTCGG CGTCATCCAT TCGGGTTTCA GCGATGAAAA CGGCCGTCAG GATGTGGAAG AACTATTTAA AAACGAACAC CAGCCCGACG CCCTGTTTTC TGTCAACGAC CGCAAAGGGA TCGGCGCCAT TCTCTGGCTG CGCGAGCATG ATATCCGGGT AGGCGAAGAA GTAGGTGTAA TAGGTTTCAC AAACGACCCA ACGTCCAGGA TCATATCCCC GTCACTATCC ACAATCGCCG AACCCGCCTA CGAAATCGGC CGAAAAAGCT GCGAAGTCCT CATTAAACAC ATTCAGAAAC AAAGTTATCC AACGCAGAAA ATATCGCTGC CCACGGAATT GATCGTGCGT GAATCTACGA GCAGAGGCGG CAAACCGACG TGA
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Protein sequence | MTKRITTIKD IAKALGISVA TVSRAMRDTY DVSAETRKLV LDTAAKMNYR PNFNATGLVR SGTHKIAVII PAITNYYFST VITGIQEYAL EQNYQVMLYL TNDSAYWENK VVRELSLSSV DGLLACITYE TTDFSHFEEL VEADIPLVFF DRVPESVTTS VVVQDDYTGA CMATEHLISQ GYSKIAHLAG PCGLDLTQQR LQGYLDTLKK HNLESFGVIH SGFSDENGRQ DVEELFKNEH QPDALFSVND RKGIGAILWL REHDIRVGEE VGVIGFTNDP TSRIISPSLS TIAEPAYEIG RKSCEVLIKH IQKQSYPTQK ISLPTELIVR ESTSRGGKPT
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