Gene Dfer_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3266 
Symbol 
ID8226841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3999603 
End bp4000625 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content51% 
IMG OID644931095 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003087643 
Protein GI255037022 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.030441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAA GAATAACCAC GATTAAAGAC ATTGCCAAAG CACTCGGTAT ATCGGTTGCG 
ACCGTCTCGC GCGCGATGCG GGACACGTAC GATGTAAGCG CCGAAACGCG TAAACTGGTG
CTCGATACCG CGGCGAAAAT GAATTACCGG CCCAATTTCA ATGCAACGGG GCTGGTCAGA
AGCGGCACAC ACAAAATCGC GGTGATCATT CCGGCGATCA CCAACTACTA TTTTTCAACA
GTGATCACGG GTATTCAGGA ATATGCGTTG GAGCAGAACT ACCAGGTCAT GTTGTATCTG
ACCAACGATT CGGCCTATTG GGAGAATAAA GTGGTACGTG AACTCTCGCT GAGCAGCGTC
GACGGCCTGC TGGCGTGCAT CACTTATGAA ACGACCGATT TCAGTCATTT TGAAGAGCTG
GTTGAAGCGG ACATACCCCT GGTTTTTTTC GATCGCGTGC CCGAGTCCGT TACAACGTCG
GTAGTCGTTC AGGACGATTA TACGGGCGCC TGCATGGCTA CCGAGCATCT TATTTCACAG
GGCTATTCCA AAATAGCCCA CCTCGCCGGC CCCTGCGGCC TGGACCTGAC CCAGCAACGA
CTGCAAGGAT ACCTAGACAC TTTGAAAAAG CACAATCTCG AATCCTTCGG CGTCATCCAT
TCGGGTTTCA GCGATGAAAA CGGCCGTCAG GATGTGGAAG AACTATTTAA AAACGAACAC
CAGCCCGACG CCCTGTTTTC TGTCAACGAC CGCAAAGGGA TCGGCGCCAT TCTCTGGCTG
CGCGAGCATG ATATCCGGGT AGGCGAAGAA GTAGGTGTAA TAGGTTTCAC AAACGACCCA
ACGTCCAGGA TCATATCCCC GTCACTATCC ACAATCGCCG AACCCGCCTA CGAAATCGGC
CGAAAAAGCT GCGAAGTCCT CATTAAACAC ATTCAGAAAC AAAGTTATCC AACGCAGAAA
ATATCGCTGC CCACGGAATT GATCGTGCGT GAATCTACGA GCAGAGGCGG CAAACCGACG
TGA
 
Protein sequence
MTKRITTIKD IAKALGISVA TVSRAMRDTY DVSAETRKLV LDTAAKMNYR PNFNATGLVR 
SGTHKIAVII PAITNYYFST VITGIQEYAL EQNYQVMLYL TNDSAYWENK VVRELSLSSV
DGLLACITYE TTDFSHFEEL VEADIPLVFF DRVPESVTTS VVVQDDYTGA CMATEHLISQ
GYSKIAHLAG PCGLDLTQQR LQGYLDTLKK HNLESFGVIH SGFSDENGRQ DVEELFKNEH
QPDALFSVND RKGIGAILWL REHDIRVGEE VGVIGFTNDP TSRIISPSLS TIAEPAYEIG
RKSCEVLIKH IQKQSYPTQK ISLPTELIVR ESTSRGGKPT