Gene Dfer_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3263 
Symbol 
ID8226838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3996059 
End bp3997201 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content50% 
IMG OID644931092 
Producthypothetical protein 
Protein accessionYP_003087640 
Protein GI255037019 
COG category[S] Function unknown 
COG ID[COG4299] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00526727 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAGCAC CGTCTGTTGT CGTTAAAAAG GAAGTAAGGC CGTCCAGCTC CCCCGGGCGG 
CTCGCGTCGA TCGATGCGTT GCGAGGATTC GATATGCTGA TGATCGCGGG CGGCGGGCAG
TTTATTGCCA CGCTTGGCGG TAAAACGGGC ATTTCGTTTA TCGACGCCGT GGCGGCGCAG
TTTGAACATC CCGCATGGAA TGGCTTTACT TTTTATGATT TTATATTTCC CCTGTTCCTG
TTTTTAGCCG GTACTTCGCT GGCATTCAGC GTCACGGGTG GATTAGCGAA AGGCATTCCG
CCATCGGTGA TCCGAAATAA GGTGTTCAAA CGAATGCTGA TCCTGATCGC GCTCGGCATA
CTCGATAAGA ATGCGCCGAT GGACATTTTC GATCCCGCGC ACATTCGCTA TGGAAGCGTG
CTCGGGCGAA TCGGGCTTGC CACGTTCATT TCGGCGATTC TGTACATGAA GTTCGGAACG
AACCAGCGTT TGTACATCGG CGTGGGCATT CTCGTCGCTT ATTATCTGAC CTTGATATTG
GTGCCTGTGC CTGGCTTCGG CTCCGGAGAT CTCACATTCG AAGGAAATCT GGTCGGCTGG
ATTGACCGCA ATTTTATGCC TGGCATTTTG AAGCAGGGCA CTTATGATGA ATTGGCATTG
CTTACGCAAT TTCCGGCATT ATGCCTTACA CTTTTCGGTA CGGTGGCTGG TGATGTGCTG
CTGAGAGAAA ACCGCGGGAA TTCTAAAATT GGAAAGCTTT TGTTATTTGC GTCCACAGGC
ATTTCGATCG GGATACTCTG GAATTTTGCA TTTCCGATTA ACAAACACCT GTGGTCCAGC
TCATTCATCA TGCTTACTTC GGGAATGGCA TTCGCGATGC TGGCGCTGTT TTACTGGATC
ATTGATGTGA AAGGTTTTCA GAAATGGGCG TTCTTCTTCC GGGTGATCGG GCTGAACTCG
CTTGTCATTT ATCTGGCGGT GCGCTTTGTG GATTTTAACG AGTCGTCGCG GCTGCTTTTC
GCGGGCATTT ACAAGCATGC GCCCGAAAAC TGGCATGAGG TGTACAATGC ATTGGGTGGT
TTCGTGCTGG TTTGGCTGTT TCTCTACTTT TTATACCGTC ACAAAATATT TGTAAAAGTC
TAG
 
Protein sequence
MEAPSVVVKK EVRPSSSPGR LASIDALRGF DMLMIAGGGQ FIATLGGKTG ISFIDAVAAQ 
FEHPAWNGFT FYDFIFPLFL FLAGTSLAFS VTGGLAKGIP PSVIRNKVFK RMLILIALGI
LDKNAPMDIF DPAHIRYGSV LGRIGLATFI SAILYMKFGT NQRLYIGVGI LVAYYLTLIL
VPVPGFGSGD LTFEGNLVGW IDRNFMPGIL KQGTYDELAL LTQFPALCLT LFGTVAGDVL
LRENRGNSKI GKLLLFASTG ISIGILWNFA FPINKHLWSS SFIMLTSGMA FAMLALFYWI
IDVKGFQKWA FFFRVIGLNS LVIYLAVRFV DFNESSRLLF AGIYKHAPEN WHEVYNALGG
FVLVWLFLYF LYRHKIFVKV