Gene Dfer_3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3258 
Symbol 
ID8226833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3989607 
End bp3990821 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content54% 
IMG OID644931087 
ProductGlycine C-acetyltransferase 
Protein accessionYP_003087635 
Protein GI255037014 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.124677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACA GCCATCACTA CTTTTCGTTC CCGATGCTGG AAGGAGAACT TGGTCCGCGC 
ATGAGGTTTA TGGGACGGGA AGTGCTGAAC TGGAGTCTCA ATAATTATCT GGGCCTGGCC
AACCATCCGG AAGTTCGCAA AGCGGATGCC GATGCTGCCG CCAAATGGGG CCTCGCTTAT
CCAATGGGCG CCAGGATGAT GTCGGGGAAT TCCGAGCTGC ATGAAACTTT TGAAAAGGAA
CTGGCGCAGT TTGTCGGTAA AACAGACGCT TTTCTCCTTA ATTACGGCTA TCAGGGCGTT
ATGTCCGCGA TCGAATGCCT TTGCGACCAT CGCGATGTGA TCGTGTACGA TGCCGAATCG
CACGCGTGTC TGATAGACGG TATCCGCCTG CACAAAGCTA AGCTGGGCGA ATACTACAAG
TTCAACCACA ACGACATGGC CAGCCTTGAA AAGAACCTGA TCCGCGCCAC CAAACTCGCA
GAAGAAAAAG GCGGCGGCGT GCTGGTAATC ACCGAAGGCG TTTTTGGAAT GTCGGGCAAG
GTAGGCGACC TGAAAGCCAT TGCAGAACTG AAAAAGAAAT ACAATTTCCG TCTCCTGGTG
GACGATGCCC ACGGATTTGG AACAATGGGG GAAACCGGTG CCGGTGTAGG CGAGCTGCTC
GGTGTGCAGG ACGAAATCGA TCTGTACTTC TCGACGTTCG CGAAGTCGAT GGCCGCTATC
GGTGCATTCA TCGCTTCGAA TGATCCCGAG ATCATTATGT TCCTTAAATA CAACATGCGC
TCGCAAACCT ACGCGAAGGC GCTTCCGATG CCTTACGTGG AGGGCTGCCG CAAACGCCTG
GAAATGGTGA AGCAAATGCC GGAACTGCGC GCGAAGCTTT GGGAGAACGT GAAAGCCATG
CAGGATGGCC TTCGCAGCCG CGGCTTCAAC ATCGGAGAAA CCGAATCGCC CGTAACGCCT
GTGTTTTTGC ATAGCGAAGG CGGCGTTCCG GAAGTAACCC GCATGGTGCG CGACCTGCGT
GAGAATATGG GTGTCTTCTG CTCGATCGTC GTGTACCCGG TGGTGCCGAA GGGTCAGATC
ATGCTGCGCA TCATTCCGAC CGCCTCACAT ACGCTGGAAG ACGTGGAATA CACGCTGAAT
GCATTTACAA CGCTCGCCGA AAAACTCAAG AACAGAGTGT ACCAAAGCGA TGCCGTACAG
GAGGTCATAG AATAG
 
Protein sequence
MLNSHHYFSF PMLEGELGPR MRFMGREVLN WSLNNYLGLA NHPEVRKADA DAAAKWGLAY 
PMGARMMSGN SELHETFEKE LAQFVGKTDA FLLNYGYQGV MSAIECLCDH RDVIVYDAES
HACLIDGIRL HKAKLGEYYK FNHNDMASLE KNLIRATKLA EEKGGGVLVI TEGVFGMSGK
VGDLKAIAEL KKKYNFRLLV DDAHGFGTMG ETGAGVGELL GVQDEIDLYF STFAKSMAAI
GAFIASNDPE IIMFLKYNMR SQTYAKALPM PYVEGCRKRL EMVKQMPELR AKLWENVKAM
QDGLRSRGFN IGETESPVTP VFLHSEGGVP EVTRMVRDLR ENMGVFCSIV VYPVVPKGQI
MLRIIPTASH TLEDVEYTLN AFTTLAEKLK NRVYQSDAVQ EVIE