Gene Dfer_3248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3248 
Symbol 
ID8226823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3981566 
End bp3982075 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content55% 
IMG OID644931077 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003087625 
Protein GI255037004 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0965869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGA CCCCCCATTT AAGAATTATC TCCTGCGACG ATACACTTTA TGATGCTATC 
CGCATGGGAA ACAATACATT AGCCCGCGTA ATGGGCGTCA ATGTCCCCAA GAAGTGGACC
GAGTTCCGCG ATACTTTCAC CCCGTCTTAC CACCGCTGGA AGGCCCACCC GCCGTTGCGC
GACTGGTGGG TTTACCTGAT TATACACGTG CCGGACAACA TGCTCATCGG TTCCTGCGGC
TACAAGGGCG AGCCCGATTC GAACGGGATG GTAGAGATTG GGTATGAGAT CATTCCGTCA
TACCGCGAGA AAGGGCTAGG CACTGAAACG GCCAAAGGAT TGCTCGATCA CGCATTCGGG
CACGCGTCCG TCAGAAAAGT GATCGCGCAC ACGCTGGCGG AGGAAAATGC TTCGGGGCAC
ATTCTCGAAA AGCTGGGTTT TGCACAAACC GAAGACGTGA ACGATCCCGA CGAAGGGCTG
CTGTGGCGCT GGGAAATCAG CCGCCGTTAA
 
Protein sequence
MILTPHLRII SCDDTLYDAI RMGNNTLARV MGVNVPKKWT EFRDTFTPSY HRWKAHPPLR 
DWWVYLIIHV PDNMLIGSCG YKGEPDSNGM VEIGYEIIPS YREKGLGTET AKGLLDHAFG
HASVRKVIAH TLAEENASGH ILEKLGFAQT EDVNDPDEGL LWRWEISRR