Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3231 |
Symbol | |
ID | 8226806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3959624 |
End bp | 3960136 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644931060 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003087608 |
Protein GI | 255036987 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.172906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTCATTC AAACCGACAA ATCGTTTGAA GAACTCTACC ATCTGCATTG GGAAAAGGTA TTTGCGGTAT GCTACCAGGG CACGCGCGAT GCCGGGCGGG CCGAGGATCT GATGCATGAA ATCTTCCAGT CGGTATGGGA GCGGCGCGGT GAACTGCGCG TGCACGGCCC GGCGGCGCAT TACCTCGTAC GCGCCGCAAA GCTCAAACTC CTGGCCTACC ACCGCGACAC GGCCAATCGA AGGCAGATCA TTGACCAGAT CGTTGGCCAA AAAGCCGGAT TCGAGGAAAC CACCCAGCGC CAGGTCGATT ACCAACTCCT TTCCGATCGC GTAATGGAGC TCGTGGCCGG CTTGCCGCAG CCCTGCCAGG AGGTGTTTGT GATGAGCCGG CAGAAAGGCT TGTCCAACAA AGCCATTGCC GCGTCGCTCG TTTTGTCCGA AAAAACCGTG GAATACCACC TCACACGCGC CTTGCGCTTC CTCAGCAAGC AGCTCGCCGA ATACCAGCAT TAA
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Protein sequence | MLIQTDKSFE ELYHLHWEKV FAVCYQGTRD AGRAEDLMHE IFQSVWERRG ELRVHGPAAH YLVRAAKLKL LAYHRDTANR RQIIDQIVGQ KAGFEETTQR QVDYQLLSDR VMELVAGLPQ PCQEVFVMSR QKGLSNKAIA ASLVLSEKTV EYHLTRALRF LSKQLAEYQH
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