Gene Dfer_3226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3226 
Symbol 
ID8226801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3954693 
End bp3955595 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content54% 
IMG OID644931055 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_003087603 
Protein GI255036982 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAAGA AGAAAATCCT GATCACCGGC TCCAACGGGC TGCTCGGCCA GAAACTCGTA 
GCACTGCTGG TTTCAAAAGC GCATATCGAA ACGATCGCGA CGGCGCGCGG CGAAAACCGC
CTGCCGTTTC AAACGGGCTA CCGTTACGTT GAAATGGATA TTACCGACCC CGAATCCGTT
GATCGCGTGC TTGACGTGGA ACGCCCGCAT GTGCTCATCC ACACGGCCGC GATGACGAAC
GTCGATCAAT GTGAAATTGA GAAAGATGCG TGCTGGAAAT TGAACGTAAC GGCCACCGAA
ACGCTGGTTG CCGCCTGTGC GAAGTACAAA ATCTTCCTGG AACATGTTTC TACGGATTTC
GTATTCGACG GTACTTCGGG GCCTTACCGT GAGCAGGATG TGCCGAATCC GGTGAGTTTT
TATGGTTGGA GCAAATATGC GGCGGAAAAG GCCGTGATGT CGTCGGACAT CGAATGGGCC
ATCGCGCGCA CAGTGCTCGT GTACGGCATC GCGCACGATA TGAGCCGGAG CAATATCATT
CTTTGGGTTA AAAAATCGTT GGAGGAAGGC AAGGCCATCA AGGTCGTAAC CGATCAGTTC
CGCACGCCTA CTTTGGCCGA GGACCTTGCA CTAGGCTGCT TCCTCATCGC TGATCAGGAA
GCCAAAGGCA TTTATCACAT TTCCGGAAAG GATTTTCTGA CACCCTACGA AATGGCCCTC
GCCACCGCAG AATACTTCGG CCTCGACGCC TCGCTCATTT CACCTACCGA CGCATCTGCA
TTTACCCAAC CAGCCCGCCG CCCGCCGCGA ACCGGTTTTA AACTGACCAA AGCAAGCAAT
GTGCTGGGCT ACGAGCCGCA TTCATTTCGG GAAGGGATTG CGATTCTGGC GGGGCAGATT
TAG
 
Protein sequence
MEKKKILITG SNGLLGQKLV ALLVSKAHIE TIATARGENR LPFQTGYRYV EMDITDPESV 
DRVLDVERPH VLIHTAAMTN VDQCEIEKDA CWKLNVTATE TLVAACAKYK IFLEHVSTDF
VFDGTSGPYR EQDVPNPVSF YGWSKYAAEK AVMSSDIEWA IARTVLVYGI AHDMSRSNII
LWVKKSLEEG KAIKVVTDQF RTPTLAEDLA LGCFLIADQE AKGIYHISGK DFLTPYEMAL
ATAEYFGLDA SLISPTDASA FTQPARRPPR TGFKLTKASN VLGYEPHSFR EGIAILAGQI