Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3215 |
Symbol | |
ID | 8226790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3940582 |
End bp | 3941424 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644931044 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003087592 |
Protein GI | 255036971 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.979822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGA TTACATTATC TGCTTTTTTG TTGCTTTTGC TGGTTTTCAA AACGTCCGCA CAGGTTCGTC CGATCCGCAA AGAGTTTTTA AATCCAAATT CTAAAAATGT GCTGGTGGCG TCGCATCGCG CGGTGCACCA TGAATTACCC GAAAACTCCC TTCCCGCGAT CCGCGAGGCG ATCAGGCTGG GCGTTGACAT CATCGAAATA GACGTTAAGG TGAGTAAGGA TGGCATACCG ATGCTCATGC ACGACGGCAA GGTCGATCGC ACGACCACCG GCAACGGTGA TCTCGAAACG CAAACATTCG ACGATTTGCG GAAGCTCCGG CTCGTTTCTA ATGGGCAGGT CACGGACGAA ATGATTCCCA CACTGCAAGA AGCATTGCAG GTTGCGAAAG GACGGATACT GGTCGACCTG GACCTGAAAA CGGAGCAGAT TGACAAGGTG ATCAAAGTGG TGAAAAAAAT GAATGCAGAG AAGTATGTAT TCTTTTTTGA CAGCGATTAC GAGGTGCTTT CGAAGGTGGA CGCCGCTTCT AAAAAGTACA TGATCATGCC CCGGGCATAC TCGCATGTAA TGGCCGACTC TGCGCTGACG CGCTTCCAAC CGGAGGTAAT CCATATAGAT TCGAAGTTCT ACACGGCGGA AGTCTGCGCT GCGATCCGCA AGCGCGGTGC AAGGGTATGG ATCAACGCCC TGGGTGCCAC GGACGAGCAA ATCAGGAAAG GAAATGCCCG GGAGGCAATT AAAAACCTAA CCAGCGCCGG CGCAAATGTC ATCCAAACCG ACGAGCCGGA GAAAGTGATG GTTACTTTGC GGGAGATGGG GTTGCGCAGA TAG
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Protein sequence | MTRITLSAFL LLLLVFKTSA QVRPIRKEFL NPNSKNVLVA SHRAVHHELP ENSLPAIREA IRLGVDIIEI DVKVSKDGIP MLMHDGKVDR TTTGNGDLET QTFDDLRKLR LVSNGQVTDE MIPTLQEALQ VAKGRILVDL DLKTEQIDKV IKVVKKMNAE KYVFFFDSDY EVLSKVDAAS KKYMIMPRAY SHVMADSALT RFQPEVIHID SKFYTAEVCA AIRKRGARVW INALGATDEQ IRKGNAREAI KNLTSAGANV IQTDEPEKVM VTLREMGLRR
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