Gene Dfer_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3215 
Symbol 
ID8226790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3940582 
End bp3941424 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content52% 
IMG OID644931044 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003087592 
Protein GI255036971 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.979822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGA TTACATTATC TGCTTTTTTG TTGCTTTTGC TGGTTTTCAA AACGTCCGCA 
CAGGTTCGTC CGATCCGCAA AGAGTTTTTA AATCCAAATT CTAAAAATGT GCTGGTGGCG
TCGCATCGCG CGGTGCACCA TGAATTACCC GAAAACTCCC TTCCCGCGAT CCGCGAGGCG
ATCAGGCTGG GCGTTGACAT CATCGAAATA GACGTTAAGG TGAGTAAGGA TGGCATACCG
ATGCTCATGC ACGACGGCAA GGTCGATCGC ACGACCACCG GCAACGGTGA TCTCGAAACG
CAAACATTCG ACGATTTGCG GAAGCTCCGG CTCGTTTCTA ATGGGCAGGT CACGGACGAA
ATGATTCCCA CACTGCAAGA AGCATTGCAG GTTGCGAAAG GACGGATACT GGTCGACCTG
GACCTGAAAA CGGAGCAGAT TGACAAGGTG ATCAAAGTGG TGAAAAAAAT GAATGCAGAG
AAGTATGTAT TCTTTTTTGA CAGCGATTAC GAGGTGCTTT CGAAGGTGGA CGCCGCTTCT
AAAAAGTACA TGATCATGCC CCGGGCATAC TCGCATGTAA TGGCCGACTC TGCGCTGACG
CGCTTCCAAC CGGAGGTAAT CCATATAGAT TCGAAGTTCT ACACGGCGGA AGTCTGCGCT
GCGATCCGCA AGCGCGGTGC AAGGGTATGG ATCAACGCCC TGGGTGCCAC GGACGAGCAA
ATCAGGAAAG GAAATGCCCG GGAGGCAATT AAAAACCTAA CCAGCGCCGG CGCAAATGTC
ATCCAAACCG ACGAGCCGGA GAAAGTGATG GTTACTTTGC GGGAGATGGG GTTGCGCAGA
TAG
 
Protein sequence
MTRITLSAFL LLLLVFKTSA QVRPIRKEFL NPNSKNVLVA SHRAVHHELP ENSLPAIREA 
IRLGVDIIEI DVKVSKDGIP MLMHDGKVDR TTTGNGDLET QTFDDLRKLR LVSNGQVTDE
MIPTLQEALQ VAKGRILVDL DLKTEQIDKV IKVVKKMNAE KYVFFFDSDY EVLSKVDAAS
KKYMIMPRAY SHVMADSALT RFQPEVIHID SKFYTAEVCA AIRKRGARVW INALGATDEQ
IRKGNAREAI KNLTSAGANV IQTDEPEKVM VTLREMGLRR