Gene Dfer_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3198 
Symbol 
ID8226773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3917530 
End bp3918465 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content52% 
IMG OID644931028 
Productribosome-associated GTPase 
Protein accessionYP_003087576 
Protein GI255036955 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTAA TAAGGGGTTT GGTGCTTCGT TCGACGGGTT CGTGGTACGA TGTCAGGGAT 
AGCAGGGACG GGCACATCTG GCAGTGTCGT TTGAAAGGTA AGTTCAAAGC ATTAGGTCTG
AAAGTGACCA ATCCGATAGC CGTCGGCGAT TATGTCAATT TTGAAGTGGA GAACGAGGGC
GAAAACTTTG GCATTATCCA TGAGATCGTG CCGCGCGAGA ACTATGTGAT CCGTCGCTCG
GTGCATAAAA CCGCACACGC ACACCTCATT GCCGCGAATG TGGACCAGGC CATTCTGATC
GCAACACTCG TTTTTCCGCG CACTTCCCTT GGCTTTATCG ACCGCTTCCT GGTGGCCATC
GAATCTTTCC GCATTCCCGG CGTGCTCGTA TTCAACAAGC AGGATTTGCT GGATGATGAA
ATGAAAGGTT TTCAGGCGGA GCTGATGGAA CTGTACACGT CGCTCGGCTA CCGCTGTATC
GCCACAACCG CCCTCGCGGA GCTCGGTCTG GAAGATTTTA AGCAGATTTT GAAAGGCAAA
GTTTCGCTGC TGTCGGGGCA CTCGGGAGTG GGGAAATCAA CCCTGGTGAA TGCCATTGCG
CCCGACCTGG ATATTAAGAC GCAGGAGGTA TCCACATTTG CGAACAAGGG TGTACACACC
ACTACATTCG CCGAAATGTT CGAGCTCGAA AAGGGTACGT TCATCATCGA TTCGCCGGGA
ATCAAGGAAC TTGGTCTGGC AGATATGGAG AAGGAGGAAA TCAGCCATTA CTTCCCCGAA
ATGCGAGAGA GGCTGAATGA ATGCCGCTTC AACAATTGCC AGCACATCAA CGAGCCGGGT
TGCGCAGTGA AGGATGCCGT TTCGGAAGGG AAAATCGCGA TAACGCGTTA TGAGAGCTAT
TTGAGCATGA TGCTGGGGGA TGATAACCGG AAGTAG
 
Protein sequence
MGLIRGLVLR STGSWYDVRD SRDGHIWQCR LKGKFKALGL KVTNPIAVGD YVNFEVENEG 
ENFGIIHEIV PRENYVIRRS VHKTAHAHLI AANVDQAILI ATLVFPRTSL GFIDRFLVAI
ESFRIPGVLV FNKQDLLDDE MKGFQAELME LYTSLGYRCI ATTALAELGL EDFKQILKGK
VSLLSGHSGV GKSTLVNAIA PDLDIKTQEV STFANKGVHT TTFAEMFELE KGTFIIDSPG
IKELGLADME KEEISHYFPE MRERLNECRF NNCQHINEPG CAVKDAVSEG KIAITRYESY
LSMMLGDDNR K