| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3186 |
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| Symbol | |
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| ID | 8226761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3897199 |
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| End bp | 3898299 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644931016 |
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| Product | DNA topoisomerase, type I, putative |
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| Protein accession | YP_003087564 |
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| Protein GI | 255036943 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.812354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTAG CCGCAGCCCT GGAAATGCCA ACCGACGAGC CTGTGATCAC GGCCCGGCAG
TTTAAAAAGC TCAGAAAAAA TCCCGCATTG GCCGCCGAAG CCGCGGGACT ACATTATATA
CAGTCGGCCG ACGCCCCCGG CTATACCCGG AAAGGCAAAG CGCCGCGCTT CTACTACACC
GATGCCGCCG GTCAGCGCTG CAAGGACCCG GAGACGATCA AGCGCATCCG GTCGCTCGTG
CTGCCGCCTG CCTGGACGGA CGTGTGGATC AGCGCAGATG CGGACACGCA TTTGCAGGCC
ACGGGCATCG ACGCCGCCGG CCGCAAGCAG TACCGCTACC ATCCCTACTG GAACCTGGTG
CGGAACCAGG CGAAATATTA CAAACTGCTC ATGTTCTCCG AGGCATTGCC CGTGCTGCGC
GAGCAGGTGG AGCACGATTT GCGCAAGCGC GATTTCGACC TGTCCAAGGT GATTGCGCTG
GTGATCAAGC TAATGGACAA AACCTGCATT CGCGTGGGTA ACCAGCGCTA CAAGGTGCGC
CACGGCTCAT CGGGCATTAC CACCCTCGAC GCCCGTTGCG CAACCGTCAC GGGCAGCCGC
ATCCGCTTTA TGTTCAAAGG AAAGAAAGGT ATCCAACAGG ACATTACCCT CCGCGACAAG
CAGCTTGCCC GACTGGTGAA ACAATGCAAG GAAATGCCCG GAAAGCGGTT GTTTCAATAC
ATTAATGAAA ACGGCGGCAA ATGCGCGCTG AATGCACAAC AGGTGAACGA CTACATCCGC
CGCCACACGG GAGCAAGTTT CTCCGCCAAG GATTTCCGGA CCTGGATGGG CACCGTCACT
GCGTTTGAAT ACCTGAGCCA CCAGGAAAAA GCCGCGTCAC AGCGCCAGCT TACCCGCACG
CTGAACTCCT GCCTCGACGC CGTAGCTGCC CATCTGGGCA ATACCCGGGC TGTTTGCAAA
AAATATTACG TGCATCCTGC TGTTTTCAGG GCTTATGAGA ACAACCGCAT TCAACGGTTT
TTGAACAAAC AAGTGGAAGA AGCCGCCCAT TTCTCCGAAA CCGAGCAATA TGTGCGGGCA
TTGCTGGCAC GGCCGTCCTG A
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| Protein sequence | MSVAAALEMP TDEPVITARQ FKKLRKNPAL AAEAAGLHYI QSADAPGYTR KGKAPRFYYT
DAAGQRCKDP ETIKRIRSLV LPPAWTDVWI SADADTHLQA TGIDAAGRKQ YRYHPYWNLV
RNQAKYYKLL MFSEALPVLR EQVEHDLRKR DFDLSKVIAL VIKLMDKTCI RVGNQRYKVR
HGSSGITTLD ARCATVTGSR IRFMFKGKKG IQQDITLRDK QLARLVKQCK EMPGKRLFQY
INENGGKCAL NAQQVNDYIR RHTGASFSAK DFRTWMGTVT AFEYLSHQEK AASQRQLTRT
LNSCLDAVAA HLGNTRAVCK KYYVHPAVFR AYENNRIQRF LNKQVEEAAH FSETEQYVRA
LLARPS
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