| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3185 |
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| Symbol | |
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| ID | 8226760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3894742 |
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| End bp | 3897030 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931015 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_003087563 |
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| Protein GI | 255036942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.97115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATTA AGGACATTGT GAATCGCGAC ATTGTCAACC TGACAAATTG CGAAAGTGAA
CCCATCCATA TACCAGGCAG TATCCAACCC CACGGCTTTT TGCTGGGGAT TAAAAAAGGA
GATTTCAGAA TTGAGTTCTG CAGTGCCAAC ACTGCAGACT TTATAGGCGC AGGCCCCGAG
AAACTGCTCG GCAAATACAT TGCAAAAGTC TTCCCCGAGG AACAAGCATC ACTCTTCGCG
TCATATGCTA ATGAGGAAGT GATCGACCCG GCCAAACCGT TCGTATTCAT ACTGCACGGC
ACCTCGTTTA ACACCACCGT GCACCAGAGC GGCGATAATG TGATCATGGA ACTCGAGCCG
TTCCCGGACG GCACGCTGCA ATTGCCTAAC CTGTACACAC AAACCCGGAA CTTCGTGTCG
ATCATGGAGA AGTCTACCGG CTTGCTGGAC CTCTGCCAGG AGGTTGCGGA CGAAACGCGC
AGCATTACCG GCTATGATCG TGTGATGATC TATCGCTTCG ACGAACAATA CAATGGGGAA
GTGATCGCCG AAAGCCGGCG TGAAGACCTT GTGTCGTTTG CGAACCAAAA ATACCCGCAT
ACCGACATTC CCGTTCAGGC GCGCGAGCTG TATATCCGCA ACCCGCTGCG CGTGATCGCC
GACATTAATT ACCAACCGGT GCCGCTGCTG ACGATTGACG ATTCGTCCGC CAAAGGCAAC
CATTCGCTCG ACCTCAGCCT GTCTATTCTC CGAAGCGTAT CGCCGATCCA TATTGAATAT
CTCAAAAATA TGGGTGTGGG CGCAACGCTG ACGATCTCGC TGCTGCAAAA TCAGAAACTG
TGGGGGCTGA TCACGTGCCA TCATTATGCA CCGAAGATAT TGCCGCACTA TACACGCCTT
TCCGCATTGC TGCAAGGGCA TTTCCTCACT TCCCAGATCT CGGTGCGCGA AGTGGCCGAG
GAGTACAAGA TAGGCGAGGA AGTGGATAAA GCCCTGGTAG AATCGCTTAC CATTCTCCAC
CAAACGGAGA ACTTCATGGA AGCCTGCTAC GAATCCGCGT CGTTGCTGAA ACTCGCCAAT
GCCACCGGCG CTGCCATTTA TTATGATGGC AAACTGTACA CCAACGGGCT CGTCCCACCG
GATGCCGACT TGCTCGCATT GTTTTCGTTC CTGTCGAATG CCTACCCGAA CCAGAGTGTT
GAGACCGACA ATCTGATCGA CATTTATCCG GCGGCCAGGG ATATTTCCAA ATATGCGGCC
GGCGTCGTAT TCCATTCGAT GATTTCCGGT GGAAACGACG GGATATTGTG GCTGCGGCAA
GAAAAAGTGG AGACCATCAA ATGGGCAGGA AACCCCGACA AAGCGGTTTT GAAGAATGAA
GACGGCAACC GGCTTTCGCC GCGCAAGTCT TTTGAGCTCT GGGCGGAAAT TGTGAAGGAC
AAGAGCATGC CTTGGCGGAA ATCGGAGATC AATGCCGCTT CCAGCTTCTC GTATGCATTG
CAGAAGCACA TCAATTACCG CGTGATCCGG GCGCAGGAAG ATCAGAACAG GGCGCTCAAC
GAGGAGTTGA AGCTTGCCAA CAAGGAGCTA TCCAACCTCA ACTGGATTTC CACGCACGAT
TTGAAAGAAC CGCTGCGCAA AATCCAGATT TTCGCATCCA AGGTGCTCGA CCGTGAAGAC
CCGGACCTAT CCATGCAAGT GAAGGATTCG GTGGAGAGAA TGCGCTTCGC AGCTGAAAAA
ATGCAGGTGC TGATCGAGGA CATCCTCACC TATTCGAAGG CCGGCAATAT GGAGAAGGTG
TTCGTCCGCA CCGACCTGAA CGAAGTGCTT ACTCATGTAC TAAGCGAACT GGAAGAAAAC
ATCGAGGAAA AGGGCGCTTC GGTACAGGCC GACAACCTCC CGGCGATCGA GATCATTCCG
TTCCAGGTGC ACCAGCTGTT TATCAACCTG GTTAGCAATG CCATTAAATT TGTAAAAATC
GACCGAAAGC CGGAAATCAG GATCACAACT AGCATTGTCG CCGGCGAAAA CGTGCCCGAC
GGCAAAGGAA CGAGGGGACA GCAGTACCAT GCCATTGCGT TCCACGACAA CGGGATCGGT
TTCGAAAAAG AATATGAGCA CCGGATTTTT GACATTTTCC AACGCCTTCA CCCGGCCCAC
AAATATCCGG GAACAGGTAT AGGGCTGGCC ATTTGTAAGA AGATCATGGA AAATCACCGC
GGATTCATCG ACGCCACGTC GGTGTTTGGC GAAGGCTCCG TTTTCACCAT CTATTTTCCC
GCCAAATAG
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| Protein sequence | MNIKDIVNRD IVNLTNCESE PIHIPGSIQP HGFLLGIKKG DFRIEFCSAN TADFIGAGPE
KLLGKYIAKV FPEEQASLFA SYANEEVIDP AKPFVFILHG TSFNTTVHQS GDNVIMELEP
FPDGTLQLPN LYTQTRNFVS IMEKSTGLLD LCQEVADETR SITGYDRVMI YRFDEQYNGE
VIAESRREDL VSFANQKYPH TDIPVQAREL YIRNPLRVIA DINYQPVPLL TIDDSSAKGN
HSLDLSLSIL RSVSPIHIEY LKNMGVGATL TISLLQNQKL WGLITCHHYA PKILPHYTRL
SALLQGHFLT SQISVREVAE EYKIGEEVDK ALVESLTILH QTENFMEACY ESASLLKLAN
ATGAAIYYDG KLYTNGLVPP DADLLALFSF LSNAYPNQSV ETDNLIDIYP AARDISKYAA
GVVFHSMISG GNDGILWLRQ EKVETIKWAG NPDKAVLKNE DGNRLSPRKS FELWAEIVKD
KSMPWRKSEI NAASSFSYAL QKHINYRVIR AQEDQNRALN EELKLANKEL SNLNWISTHD
LKEPLRKIQI FASKVLDRED PDLSMQVKDS VERMRFAAEK MQVLIEDILT YSKAGNMEKV
FVRTDLNEVL THVLSELEEN IEEKGASVQA DNLPAIEIIP FQVHQLFINL VSNAIKFVKI
DRKPEIRITT SIVAGENVPD GKGTRGQQYH AIAFHDNGIG FEKEYEHRIF DIFQRLHPAH
KYPGTGIGLA ICKKIMENHR GFIDATSVFG EGSVFTIYFP AK
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