Gene Dfer_3177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3177 
Symbol 
ID8226752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3887178 
End bp3887777 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content49% 
IMG OID644931007 
ProductYceI family protein 
Protein accessionYP_003087555 
Protein GI255036934 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTAC TCGCAGCAGC TGGTTTGCTT TTCAATGTTG CTGCTATTGC CAACGGTCCT 
GGAAAAAATG CTGCCGACAA AACACTGAAG GTAGATCCCA AAGCAAGCAC CATCAACTGG
GGCGCTAAAA AGGTGACAGG AACGCACGCC GGAACGGTGC CTCTGGAAAG CGGTACGCTC
GTGGTGGATA ACGACAAACT CAAAGGAGGA AGTTTTGTAG CCGACATCAA ATCGCTGGTT
GTAACCGACG TTACCGACAA GGAAATGAAC GGAAAATTGA CCAATCACCT CAAAAGCGAC
GACTTCTTCT CGGTTGAAAA ACACCCGCAG GCGAAACTGG TGATTTCATC GGTAACACCC
AAAGGGGGCA ATGCTTATGA CGTAACCGGC AAGCTCACCA TTAAGGGCAT TACGCAGGAC
GTGAAATTCC CCGCAACCGT AACAGCCGAC GCCAAAAAAG TGACTGCCAA TGCGAAAGTT
TCGATCGACC GTACGAAATA TGACATCAAA TTCCGCTCGA CGAACTTCTT CGAAAACCTG
GGCGACAAGG CGATCGACAA TGACTTTACG CTAGACGTAA ATCTGGTTGC GAACAAATAA
 
Protein sequence
MFVLAAAGLL FNVAAIANGP GKNAADKTLK VDPKASTINW GAKKVTGTHA GTVPLESGTL 
VVDNDKLKGG SFVADIKSLV VTDVTDKEMN GKLTNHLKSD DFFSVEKHPQ AKLVISSVTP
KGGNAYDVTG KLTIKGITQD VKFPATVTAD AKKVTANAKV SIDRTKYDIK FRSTNFFENL
GDKAIDNDFT LDVNLVANK