| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3158 |
|---|
| Symbol | |
|---|
| ID | 8226733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3862597 |
|---|
| End bp | 3863274 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644930988 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003087536 |
|---|
| Protein GI | 255036915 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TAGTTGTGGA GGACGAGAAA GGGCTGGCCG AAAGTATCAC GGATTATCTC
TCCCGCGAAG GGTTCGTGTG CGAAGTGGCA AACACTTTCT GGCAAGCCGA TGAGAAGATC
AGCCTGTACC AGTACGATTG CACGATCGTA GACCTCACGC TGCCCGATGG CAATGGTTTT
GACATTATCC AAACCTTGAA AAAGATCGCC GCCGCGACGG GAATTATCAT TATTTCGGCC
CGTAATACGC TGGAAGACAA GCTAAAAGGT CTCGAAATAG GTTCGGACGA TTATATGACC
AAGCCATTCC ATCTTTCCGA GTTGAATGCA CGGGTAAAAT CGCTGATCCG CCGCCGCAAT
TTTGGAGGAA ATAATGATAT GACCTGGAAA GATATCCGGG TGAACCTGCC TGCCAGGAAG
GTTTTTATTA AAGACATTGA AACCACGCTG TCGAAAAAAG AGTACGATTT GCTGCTCTAT
TTTTTGTCCA ATATCGACGT CGCATTAACG AAAGAATCCA TCGCCGAGCA CCTGTGGGGC
GATAATATGG ATTCGGCGGA CTCGCTGGAT ATGGTGTATT CGCATATCAA GAACTTGCGC
CGGAAGATCG TCGAGAAGGG CGGAAAAGAT TACATTCAAT CGATTTACGG GATAGGATAT
AAATTTACCG CACCTTGA
|
|---|
| Protein sequence | MKILVVEDEK GLAESITDYL SREGFVCEVA NTFWQADEKI SLYQYDCTIV DLTLPDGNGF
DIIQTLKKIA AATGIIIISA RNTLEDKLKG LEIGSDDYMT KPFHLSELNA RVKSLIRRRN
FGGNNDMTWK DIRVNLPARK VFIKDIETTL SKKEYDLLLY FLSNIDVALT KESIAEHLWG
DNMDSADSLD MVYSHIKNLR RKIVEKGGKD YIQSIYGIGY KFTAP
|
|---|
| |