Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3152 |
Symbol | thrA |
ID | 8226727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3852924 |
End bp | 3855380 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644930982 |
Product | bifunctional aspartokinase I/homeserine dehydrogenase I |
Protein accession | YP_003087530 |
Protein GI | 255036909 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.817335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTTC TTAAATTTGG CGGCACCTCT GTCGGATCGG TCGACAGTAT TAAAACAGTA ATCGGTATTC TCGAAGAAAA TCTGTCAAAA GGCGAACGCA TCGCGGTCGT TTTTTCTGCC ATGGGCGGGG TCACGAACAG GCTGATCGAA ATCGGGAAAA TGGCGGCCGC CGGCAATACG GAATATGTCG AATTTTTGAA GGGCGTCGAG GAAAGGCACT TTGCCGTCGT GCGCGGGCTG ATCCCGGTTA AGAACCAAAG CAGCACTTTT GCCGCCGTAA GAGGCCTATT TAATGAACTG GAAGACATCC TAAGGGGTGT TTCGTGGATC AGGGAGCTGT CCGAAAGGAC GCTCGACCTC ATCATGAGCT TCGGGGAGCG GCTTTCGACG ATGGTCATCA CCGAAATACT CAAAAGCAAA GGCGTAGCTG CGGAATTTTG CGACGCGCGT CAGATCATCC GCACAAATGC AACCTACGGC ATGGGCGATG TCAATTTTGA AGCAACCAAT CACCTGATTT TAGAACATTT CGCGAAAAGC ACGGCGCTGC AATGCGTCAC GGGCTTCATC GCATCTACCG CCGAGGGCGT CACCACCACG CTCGGCCGCG GCGGCTCCGA CTATACCGCG TCGATCCTCG GCGCAGCGCT GGAAGCCGAC TCGATCGAGA TCTGGACGGA CGTCGACGGG ATGATGACCG CCGATCCGCG CAAAGTGGCG AACGCGTTCA CGATACCATC CATTTCCTAT GCGGAAGCGA TGGAGCTATC GCATTTCGGC GCGAAAGTGA TCTATCCGCC GAGCTTACAG CCAGCATTTG CAAGAAATAT CAAGCTTAAA GTCCTCAATA CATTCAACAC CGGCTTCGAA GGAACGTACG TTCAGAAATC GGCCAACGGT AAGGAATATG CGATCACGGG TATCTCGTCG ATTGACGAAA TTGCACTCGT GAACATCCAG GGCAGCGGCA TGATCGGCGT GGCCGGTATT TCCGGGCGCC TGTTTACGGC GCTATCCAAT AATGCCATCA GCGTGATCCT CATCTCGCAG GCATCTTCGG AGCATTCGAT CTGTTTTTCC ATTGATCCAA AAAATGCGCA GAAAGCCATT GATGTGCTGG AAAAGGAGTT TGCGACGGAG ATCGGGCTGG GACACATCGA CGGTATTTCG GTTGAAAAAA ACCTCTCGAT CGTCGCCATT GTGGGAGAAG GGATGAAGAA AAACACCGGT ATCTCCGGCA AACTTTTCTC GGCTCTCGGT AAAAACGGTA TCAATGTCGT AGCGACCGCG CAAGGCTCTT CCGAGCTGAA TATTTCGGTG GTAATCGCCA AAAGCGACCT TTCCAAAGCA TTGAACGCCA TTCACGGTGT TTTCTTCCAA TCCGAAACGC GCTCGCTCAA CCTGTTTATC GTCGGGGTAG GGCTGATCGG CGGCACGCTC ATCGAGCAAA TCCGCAACCA GACCAAATAC CTGCGAGAGG AAAAGTTGCT CAACCTTAAT ATCGCGGGTT TGTCCAACAC CAAAAAAATG CTCCTCGATC CGGACGGCAT CCAACCCGAA AACTGGCGCG ACCGGGTGAT GGACGAGGGC GTGAAAACGA GTCTGCCGGC ATTTGTACAG CGCATGATCG AGCTCAATTT GCCGAACAGC GTTTTTGTGG ATTGTACTTC CGACAAGGAT ATTGTACAAT ATTACCATAT GCTGCTCGAT GCGAGCATCA GCGTCGTCAC TCCGAACAAA GTCGCCAATT CGGGCAGCTA TTCGGAATAC ATTGCCTTGC AGCGCACGGC CTTGCAGCGC GGCGTGAAGT TCTTGTACGA AACAAATGTG GGGGCAGGTC TGCCGATCAT CAACACGATC CAGGGCCTGA TGGCGAGCGG TGATAAATTC CTGAAAATCG AAGCGATCCT CTCCGGAACA CTGTCTTATA TATTCAACAA TTTCGGCGGC GACAACCGCT TTGTGGACGT GGTGAAAGAA GCAAAAGCCA AAGGCTTCAC CGAACCCGAC CCGCGCGACG ACCTTAGCGG AGCCGACGTT GGTCGTAAAA TCCTCATCCT TTCGCGGGAA GTAGGGGTAG CTTTGGAACC GGAGGAAGTG AAAATCTCGC AAATCCTGCC CGGTAACTGC CTCAACGCGC CGACGGTGGA TGCATTCTTC GAAGAATTGG AAATCTCCAA TGCCTACTTT GCAGACATGC AGGCATCGGC CGACGCCCGT GGCGAAAAGC TGCGCTACAT TGCCACGCTC GAAAACGGCA AAGCTACGAT CGAGCTCAAA ACGGTGGACG CATCGCACCC GTTTTTCACC CTTTCGGGCA GCGACAACAT CGTATCCTTC ACCACGGAAC GCTACAAAGA CCGCCCGCTG GTGATCAAAG GCCCGGGCGC CGGCGCAGAA GTAACCGCAT CAGGCGTGTT CGCGGATATC ATGAGTATCA GTAGCTATTT GGGATAG
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Protein sequence | MKVLKFGGTS VGSVDSIKTV IGILEENLSK GERIAVVFSA MGGVTNRLIE IGKMAAAGNT EYVEFLKGVE ERHFAVVRGL IPVKNQSSTF AAVRGLFNEL EDILRGVSWI RELSERTLDL IMSFGERLST MVITEILKSK GVAAEFCDAR QIIRTNATYG MGDVNFEATN HLILEHFAKS TALQCVTGFI ASTAEGVTTT LGRGGSDYTA SILGAALEAD SIEIWTDVDG MMTADPRKVA NAFTIPSISY AEAMELSHFG AKVIYPPSLQ PAFARNIKLK VLNTFNTGFE GTYVQKSANG KEYAITGISS IDEIALVNIQ GSGMIGVAGI SGRLFTALSN NAISVILISQ ASSEHSICFS IDPKNAQKAI DVLEKEFATE IGLGHIDGIS VEKNLSIVAI VGEGMKKNTG ISGKLFSALG KNGINVVATA QGSSELNISV VIAKSDLSKA LNAIHGVFFQ SETRSLNLFI VGVGLIGGTL IEQIRNQTKY LREEKLLNLN IAGLSNTKKM LLDPDGIQPE NWRDRVMDEG VKTSLPAFVQ RMIELNLPNS VFVDCTSDKD IVQYYHMLLD ASISVVTPNK VANSGSYSEY IALQRTALQR GVKFLYETNV GAGLPIINTI QGLMASGDKF LKIEAILSGT LSYIFNNFGG DNRFVDVVKE AKAKGFTEPD PRDDLSGADV GRKILILSRE VGVALEPEEV KISQILPGNC LNAPTVDAFF EELEISNAYF ADMQASADAR GEKLRYIATL ENGKATIELK TVDASHPFFT LSGSDNIVSF TTERYKDRPL VIKGPGAGAE VTASGVFADI MSISSYLG
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