Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3148 |
Symbol | |
ID | 8226723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3846101 |
End bp | 3850147 |
Gene Length | 4047 bp |
Protein Length | 1348 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644930978 |
Product | FG-GAP repeat protein |
Protein accession | YP_003087526 |
Protein GI | 255036905 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.589686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACACA CTTACAAGAG ATTTGTCCTT GTTACCGTCG CTGTTGTAAT GGCAATCGCT GGTATGGCTT ACTGGGCCGA CACAGACCAA AAATCCAATC TCCGACCAGG CGCCGGTCAA TCAGCGCACC GAAACGACAA CGCTGTGCCG CAGGAGGCAT TAGCCCAAAT TCAGCAAAAC CTAACTCAAC GCGAATACCA CATCAGTTAC GACAGTGCGA AACATGTTCT CCAAAGCCCT AACCGGATGC AGGGGCTAAG AGCTTACTAC CGTTCAGGTG AACTGACCAT CGTCAACCGA AAAGATTCAG CAGGGCACAA CTTCGAATTA AAACTGATCA ACAAAGGCAT CTACGCGGAT GGTAAAAAGC TGTTCAGCCC CCAGCGTTCC GCGGCAACTA ATCTGAAAGA CAACCACTTG CAGATCGCGC ATGACGGATT TGTGGAGGAA TATATCAACG AGCCGGGTGG TGTCAGGCAA AACTTCATCA TTGAATCCGC GCCGGACGGT ACTCGTGAAT TGGAAGTGAG ACTGGACGCC GAGGGCGCGC AAGTAAAACA AGTCGGCAAA AACGAATTGA TTCTTGCAAA ACAGAGCCTT GCAAAATTCT ATTACCGCGA TTTGCATTGC TGGGATGCCG ACGGAGAGCC GCTCGAAGCC AGCCTCGCTT ACGCGAATGG CGATATATTG ATTGAAGTCG ACGTCAAAAA CGCTGCTTTT CCTGTCACAA TCGACCCATT GGTGGTGAAT GGCACTCCTG CTAATGCATC CACCCTTCTC GAAAAAGACC AGGCGCAAGC TGCATTCGGA TACTCTGTGT CTTCCGCAGG CGACATCAAT GGGGACGGGT ATAGCGATGT GATCATCGGA GCCCCCAACT ATGATAAGGG TGAAAGTAAT GAAGGAGTGG CATTTGTTTA CATGGGTTCG GCCAGCGGCC TGGCCACTGC ACCAGACCGG ACACTGGAAG CTAACCAGCC AGATGCCAAA TTTGGAAATA GCGTAGCGAA TGCCGGCGAT GTCAATGGGG ACGGGTTCGG CGATGTGATC GTCGGAGCGC CCATGTACGA CAAAAACGAA AACAATGAGG GGGCCGCATT TGTTTACCAC GGCTCAGGAG CCGGACTTAA CGCAGTACCC ACTACCACAC TGGAAAGCAA CCAGCCCGAG GCAAATCTGG GCCAGTACGT TGCGGCGGCG GGCGATGTAA ATAATGACGG CCTCAGCGAC GTGATCACAG GTGCGCCTTT GTATGATAAA GGACAATCCA ATGAAGGCGC TGCTTTCGTC TATCATGGTA CACTGGCCGG GATATCCAAT GTACCCATCA CCACACTTGA AAGTAACCAG ATCGATGCAC AATTCGGCTG CTCGGTCAAA GGTGCCGGCG ATGTCGACGG CGACGGATAC AGTGACGTGA TCGTGGGCGC TTCGATGTAC GATAAAGGCG AGAGCAATGA AGGAGCCGCA TTCGTATACC ATGGCTCGAT AAACGGAATA GCAACAGCAG CCAAAACGAC GCTGGAAAAT AACCAGGCAG CTGCCTTTTT CGGCTTCTCT GCATCCACCG CAGGCGACGT GAACGGTGAC GGCTTTTCTG ACGTCATTGT CGGATCGTTC CATTTCGACA ACGGCCAGAA CAACGAGGGC GGGGCATTTG TTTACCACGG CTCGGCGAAT GGGATAAGTA CCACAATCGC AAAACAACTG GAATGCAATC AGGCGGGGGC ACAATATGGT GCTTCTGTCG CTTCGGCCGG GGATGTAAAC GGAGACGGGT ATGCTGATGT GATCGTAGGA GCCAACTTAT TCGACAACGG GCAGGGTAAC GAAGGCGGCG CATTTGTGTA CGAAGGTTCC TCATCGGGCT TGGCCAATAC ATCCGCATCA AGCCAGGAAG GCAACCAGCT TAATGCCTAC CTCGGCTCCT CCGTTTCCAG TGCGGGGGAT GTGAATGGAG ACGGGTATAG TGACATTGTC GTGAGTGGAC AAGGATATGA TAAGGGGGAA GCGGATGAGG GAGTGGCGAT GGTGTGGTTA GGTGGCGCAA AAGGGACTAA CAACTATGTC CAGGAACTGA ATGGGTCTCA GAATGCGGCG CAGTTTGGAT ATTCCGTTGC CAATGCAGGC GATGTGAATG GTGACGGGTA CAGTGATATA ATAGCAGGTG AATATGCGTA TAACAGTGGT CAATCAAATT CAGGGGCTGC CTACATTTAC TATGGCTCTA GTCAAGGTAT AGTTTTAAAT ACGGTCACAA AAATCGATAA TGTTTCAGGA AGTGGCCTCC TGGGTTACTC AGTGGCGGGC GCAGGGGATG TTAATGGCGA TGGCTTCGAT GACGTAATCA TTGGAGACGT AAGTTATTTC ATAAGCTGGG ACGCCCAGAA GGGCTTAGTA GAAGGTGCAG CACTAGTGTA TTATGGCTCT GCCCAAGGCC TCAATAAAAA CACTTTTTCT GTGCTGAAAA ATAATCAAAC GCAAAGCTCT TTCGGCTGGA CAGTTTCCAG CGCGGGAGAT GTGAATGGTG ATGGGTACGA CGATGTTCTG GTGGGCGATC CAAATCATGA TAAGGTATTA GACGAAGGAG CTATTTTCAT ATATCATGGT TCAGGCCAAG GCATTAGTAC AGTGGCTGCG ATTACTCTGG AAGGCACCAC ACAGGCGGAA GAACTAGGTT TAACAGCAGG GCGCGCCGGA GATGTTAATG GAGATGGTTT TGATGACATA ATCGCCGGAA CTCCACTCTA CACCAACGGA CAGACCTCGG AAGGGGCCGC TCGAATTTTT TACGGATCCA TGACAGGGAT AAACAATTCA GCTACTATAA TTGAGAACAA TGTTAGTCAA GCTTCGATGG GGCATAGCGT TTCAGGAGCT GGTGATCTAA ATGGGGACGG ATTTAGCGAT ATAGTGGTGT TCTGCGCGGT AACACAAGCG AACGAAGGAA CAACATTGGT TTACTATGGC TCTTCAAGCG GTATAAACAG CAACTCTCCA AAATCGACGC TCACCGTTGG TCAACCGGCT TACTACGGAA ATTCCGTTTC CAGTGCAGGT GATTTCAATG GGGACGGGTA TGGAGACTTG ATAGTCGGTG CGGTTAACTA TTCCCCGATA AGCAGTGGAG CTGCCTTCAT GTTCTTCGGA TCAGCGACCG GATTGTACTC CCAAACTCCT GTTAAATTCG AAAGTAATGT AGCCAATTCC CAAATGGGTA CATCCGTTGC TTGTGCAGGT GATGTCAACG GCGATGGCTA TTCAGATATC TTGATTGGAG CGCCCTTTTA CAATAGCAAA GGATCTGTAT TTCTTTACAA AGGAAACAAT GGCGCTGGCA CTCGCAACAA CCTCCGCCTC TACAACTCCA ACCTAACCAC CCCCATCAAC CACACCCAAT TCGCCCAAAA CAACTTTGGA GCGGGCCTTT ATGCCAAATC TTTCCTCGGT CGCAACAAGG CGAAACTCGT GTGGGAAACA AAACCGGCAA ACCAAGGCTT CTCCAAAGGC AGTAACAACA GCATCACCAA CAGCACCCAA TCTACTAGCG CGCAAAATGC TTATTCGAAT CTGGGCCTGG CCGGGATTGA ATTGAAAAAC GTGATCAACA AGCAAGGGGC CGGAACTAAG GTGCGGATTC GCGTAAAATA CGATCCCGTG CTCGCACTGA CCGGGCAAAC CTACAGCCCC TGGCGCTATC TGCCTGCCTA CCTGATAGGC AGCAGCACCG CTCCGGTGCC GGAACAACCA GACAATGACA TACTCGAAAC CACTAAAAAG AAAGCTACCA TGGAATTAAA CGATGAATCG AGTGAACAGA TCGTAATTTA TCCCAATCCG GCCTCCGATC AGCTGAACGT TAAAGTCAAA AATCCTGAAC TGGTTCGGAC CATGAAAATA CTTGACTTTA ACGGCACTGC GGTCTACCAA GCCACAGGGT TCAAATCTAC CATCGATATT AGCAGATTTT TAGACGGCAT TTACATTGTC CTCGTAATCA ATCAGGATGG TACACATACT ATGAGTAAAG TTCTGGTTCG GGAGTGA
|
Protein sequence | MKHTYKRFVL VTVAVVMAIA GMAYWADTDQ KSNLRPGAGQ SAHRNDNAVP QEALAQIQQN LTQREYHISY DSAKHVLQSP NRMQGLRAYY RSGELTIVNR KDSAGHNFEL KLINKGIYAD GKKLFSPQRS AATNLKDNHL QIAHDGFVEE YINEPGGVRQ NFIIESAPDG TRELEVRLDA EGAQVKQVGK NELILAKQSL AKFYYRDLHC WDADGEPLEA SLAYANGDIL IEVDVKNAAF PVTIDPLVVN GTPANASTLL EKDQAQAAFG YSVSSAGDIN GDGYSDVIIG APNYDKGESN EGVAFVYMGS ASGLATAPDR TLEANQPDAK FGNSVANAGD VNGDGFGDVI VGAPMYDKNE NNEGAAFVYH GSGAGLNAVP TTTLESNQPE ANLGQYVAAA GDVNNDGLSD VITGAPLYDK GQSNEGAAFV YHGTLAGISN VPITTLESNQ IDAQFGCSVK GAGDVDGDGY SDVIVGASMY DKGESNEGAA FVYHGSINGI ATAAKTTLEN NQAAAFFGFS ASTAGDVNGD GFSDVIVGSF HFDNGQNNEG GAFVYHGSAN GISTTIAKQL ECNQAGAQYG ASVASAGDVN GDGYADVIVG ANLFDNGQGN EGGAFVYEGS SSGLANTSAS SQEGNQLNAY LGSSVSSAGD VNGDGYSDIV VSGQGYDKGE ADEGVAMVWL GGAKGTNNYV QELNGSQNAA QFGYSVANAG DVNGDGYSDI IAGEYAYNSG QSNSGAAYIY YGSSQGIVLN TVTKIDNVSG SGLLGYSVAG AGDVNGDGFD DVIIGDVSYF ISWDAQKGLV EGAALVYYGS AQGLNKNTFS VLKNNQTQSS FGWTVSSAGD VNGDGYDDVL VGDPNHDKVL DEGAIFIYHG SGQGISTVAA ITLEGTTQAE ELGLTAGRAG DVNGDGFDDI IAGTPLYTNG QTSEGAARIF YGSMTGINNS ATIIENNVSQ ASMGHSVSGA GDLNGDGFSD IVVFCAVTQA NEGTTLVYYG SSSGINSNSP KSTLTVGQPA YYGNSVSSAG DFNGDGYGDL IVGAVNYSPI SSGAAFMFFG SATGLYSQTP VKFESNVANS QMGTSVACAG DVNGDGYSDI LIGAPFYNSK GSVFLYKGNN GAGTRNNLRL YNSNLTTPIN HTQFAQNNFG AGLYAKSFLG RNKAKLVWET KPANQGFSKG SNNSITNSTQ STSAQNAYSN LGLAGIELKN VINKQGAGTK VRIRVKYDPV LALTGQTYSP WRYLPAYLIG SSTAPVPEQP DNDILETTKK KATMELNDES SEQIVIYPNP ASDQLNVKVK NPELVRTMKI LDFNGTAVYQ ATGFKSTIDI SRFLDGIYIV LVINQDGTHT MSKVLVRE
|
| |