| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3120 |
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| Symbol | |
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| ID | 8226694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3807930 |
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| End bp | 3809315 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644930950 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003087499 |
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| Protein GI | 255036878 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.369114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.932515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT GGTTTACACT GCTTCGTGAG GCTATTCGTG GCTCCGAAGA AAGTTTTACC
GAAGGAAGCA TCAACCGCGC CATATTCCTG CTGTCAGTAC CCATGATCCT TGAAATGGTC
ATGGAGTCGC TGTTCGCGGT GGTCGATATT TTCTTTGTTT CAAAAGTAAG TACCGAGGCC
GTCGCTACGG TGGGCCTTAC CGAGTCGGTG ATTACGCTGG TTTATTCCGT AGCCATTGGT
TTGAGTACCG CCGCTACGGC TACCATTGCA CGCCGGACCG GCGAGGGCAA CACCGCACAA
GCCCGACATG CGGTAGGCCA GGTCATTTTC ATTTCGCTGG CGGTTTCTTC TGTCACGGCG
CTGATCGGTT TCTGGCTGGC CGGTGATATC CTGCGCATGA TGGGCGCCGA TCAGAAGGTG
ATCGAAACGG GTACCAATTT TGCGCGCATT CAGTTTCTGA GCAGTCCGGT GGTGGTGCTT
TTGTATTCAC TGAGCGGCGC TTTGCGGGGC GCGGGTGCGG CGGCAACGGC CATGCGCTCG
CTGATGATCG CCAATGGTTT CAACATGCTT TTAGGGCCGC TCCTCATTTT TGGCGTCGGG
CCGTTTCCCG AGCTGGGCGT AACCGGCGCG GCATTGGCTA CGGCCACCGG GCGGACGATC
GGTGTGGGTT ATCAGCTGTT TTCGCTCGTA AAGGGAAATC GGGCGCTGGG TTTGTTGTGG
GAGGATCTTA AACCAAATAT GGAAACCATC ACGGCGATCG TCAAGGTAGC CACTGGGGGC
ACTGTACAGT TCCTGATCGG CTCCGCGAGC TGGATTTTCC TTACGCGCAT TCTGTCCGAA
TTCGGTAGCG ATGTGGTGGC GGGTTACACC ATTGCCATCC GCGTGATCAT GTTCACGTTG
CTGCCGGCGT GGGGGCTTGC CAATGCGGCG GCTACGCTGG TGGGCCAGAA TCTCGGTGCA
AACAAGCCCG ACCGGGCAGA GGCTTCGGTG TGGAAATGTG CTTCGTTTAA CCTGATGTTC
CTGGCGGGGC TGGCGGTGGT CATGTTTATC GGCGCCGAAG CGATTGTCGG ATTGTTCAGC
TCGCAGCCCC AGGTGGTCGA AACCGGGAAA CTGGCATTGC GGGTGCTTTG CTTGGGCTAC
GGGTTTTATG CCTACGGGAT GGTGGTGATC CAGTCGCTGA ATGGCGCGGG CGATACCCAA
ACCCCAACGG TTCTCAACCT GATCGCATTC TGGACGGTAC AGATCCCGAC TGCGTATGTA
CTGGCCGTTA TCCTGGATTT CGGGCCGGTG GGCGTTTTTG CTGCGGTACC TATTGCGGAG
TCGGTGCTGG CGATGCTGGG CATCTGGCGG TTCCGCCTTG GGGGATGGAA GGTCGTTAAA
GTCTGA
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| Protein sequence | MKKWFTLLRE AIRGSEESFT EGSINRAIFL LSVPMILEMV MESLFAVVDI FFVSKVSTEA
VATVGLTESV ITLVYSVAIG LSTAATATIA RRTGEGNTAQ ARHAVGQVIF ISLAVSSVTA
LIGFWLAGDI LRMMGADQKV IETGTNFARI QFLSSPVVVL LYSLSGALRG AGAAATAMRS
LMIANGFNML LGPLLIFGVG PFPELGVTGA ALATATGRTI GVGYQLFSLV KGNRALGLLW
EDLKPNMETI TAIVKVATGG TVQFLIGSAS WIFLTRILSE FGSDVVAGYT IAIRVIMFTL
LPAWGLANAA ATLVGQNLGA NKPDRAEASV WKCASFNLMF LAGLAVVMFI GAEAIVGLFS
SQPQVVETGK LALRVLCLGY GFYAYGMVVI QSLNGAGDTQ TPTVLNLIAF WTVQIPTAYV
LAVILDFGPV GVFAAVPIAE SVLAMLGIWR FRLGGWKVVK V
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