| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3109 |
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| Symbol | |
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| ID | 8226683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3798775 |
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| End bp | 3801012 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930940 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003087489 |
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| Protein GI | 255036868 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.87493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCAAA TCATGAATAA ATACCTTTTG GGAGGACTGC TCACGCTGCT TTGCTCCTCC
ATTTACGCAC AACGTATAAC TGGGTCGGTC AACGAACAGC AACCGCAAAC CAAAAACCTG
ACCCCGATCA CCGGCGCCAA TGTGTACTGG TCCGGAACCA CGCAGGCGAC CGCCACCGAT
GAAAACGGGC GGTTCAGCAT TCCGCGGTCG GCGCAGTCGG CGCTGCTGGT GGTGAGCTTC
GTCGGCTTCC GGAACGACAC CATTAAAATC GGTCAGGAAA GCGAATTGCA GGTCGTTCTG
CAAAGCGACC AAACGCTCGA CGAGGTGACT GTACGCGCCG GAAATACCTC CATCGACCGC
CTTTCTCCTC ATCAAACCGA AATCATCACC ACCCGCGCAC TCGCCAAGGC CGCCTGCTGC
AACCTTTCCG AAAGTTTCGA AACCAATGCA TCAGTATCGG TATCTTACAG CGATGCCGTG
ACGGGCTCCA AGCAGATCCA GATGCTGGGT TTGAACGGCA CGTACATCCA GACGAACGTC
GAGAATATCC CCTCGATCCG CGGCCTGGCG TCTACTTTCG GGCTTAACTT CGTGCCCGGA
ACGTGGATTC AGTCGATCGA CGTCGGCAAA GGCGCGGGTT CCGTCGTCAA CGGCTACGAG
TCGATGACGG GGCAGATCAA TGTGGAACTT CAAAAACCGG ATACGCACGA AAAGCTTTAT
CTGAACACCT ACGTCAACAA CTTCGGCCGC GCCGAAGTGA ACCTGAACCT CGCCCACCAG
CTCAACGAAA AATGGAGCAC CGGGCTGCTC ACACACGGCA GCACCCTGCG CAACCGCGTC
GACAAAAATG GCGACGGCTT CCTCGACCTT CCGCTTTACG CGCAGTACAA TGCCATTAAC
CGGTGGAAAT ACCAGGGCAA CAAGATGATG GCGCAGTTTG GCGTGAAGGC ACTTTATGAA
GACCGGCTAG GCGGCCAGAA GGATTTCGAA CGCGAAATGA AAGGCACAAC GCAGGCTTAC
GGCTTCGGTG CGAAGGTGAA CCGCTATGAG TTTTTCTCAA AAATCGCACG ACTGTTTCCT
GAGCAACCCT ACAAAGGGCT CGGCCTGATC CTGAATGCTT CGCTGCATGA TTCGAAATCG
TATTTCGGCC TCAGCAACTA CGACGGCACG CAGAAGACAC TTTACGGAAA CCTGATTTAT
CAGTCGATCA TCGGCAATAC GAATCATTCC TATAAAACCG GGATCAGCTA TATGCTCGAC
AATTATGACG AGGTTTATAA GAATATCCGC CTGAAAAGAA ACGAATCGGT GCCGGGGGCA
TTCTTTGAAT ATACCTATAA CCACCTCGAC AAATTTGTGA TGGTAGCCGG AGGACGCGTC
GATTTTCACA ACCTCTACGG CACGCAATGG ACCCCGCGCC TGCATTTGAA ATACAGCCTC
ACCGACCAAA CTACCCTGCG GGCGTCGGCC GGGCGTGGAT TCAGGGTCGC CAATCCGCTG
GCCGAATACT ATGGTAACCT CGTGAGTTCC CGCAATGTGA CATTCCGTGA AGCCATCCGC
CCCGAAGTGT CGTGGAACTA CGGCGCCAGC GTGACACAGG AATTCAAACT TGGCGAAATG
AGCGGAAGTT TTATCATGGA TTTTTACCGC ACCGATTTTG AAAACCAGCT CGTTGCCGAT
ATGGAAGATC CGCGTTACAT TCGCTTCTAC AACCTTGAAG GCAAGGCTTA CGCCAACAGC
TTCCAGGCCG AAGCCAACCT GACGCCCATC AAGCGCTTTG AACTGAAACT GGCCTACCGG
CTTTTCGATG TGAAACAGAC GATCCGCGAC GTGTACGACG CCAGCACATT GCAGCCGCGC
ATGATGGTGA GCCGCGATAG GGTGCTGTTC AATGCCGGGT ATGCGCTGCC TTACGATAAA
TGGAAGTTCG ACGCCACGGT GCAATGGAAC GGCAAGCGCC GGCTTCCGTA CATGGGCCAT
GTGCCCGATC ACCACGTTCC CAACAACCTG AGATCGACCA TGTCGCCGTC ATTTTACAAC
CTGAATGCAC AGATTACCCG CACATTCCCG AAATGGGATA TTTACCTCGG AGGTGAAAAT
CTGGCCAATT TCCGTCAGAA AGATCCGATC ATGGGTGCTA AGGACCCATT CGGTCAGCAT
TTCGATGCCG GCATGGCATG GGGGCCCGTC GTAGGGCGAA TGATTTATGC AGGAATGCGT
TATAAGATTA TCCGGTAA
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| Protein sequence | MRQIMNKYLL GGLLTLLCSS IYAQRITGSV NEQQPQTKNL TPITGANVYW SGTTQATATD
ENGRFSIPRS AQSALLVVSF VGFRNDTIKI GQESELQVVL QSDQTLDEVT VRAGNTSIDR
LSPHQTEIIT TRALAKAACC NLSESFETNA SVSVSYSDAV TGSKQIQMLG LNGTYIQTNV
ENIPSIRGLA STFGLNFVPG TWIQSIDVGK GAGSVVNGYE SMTGQINVEL QKPDTHEKLY
LNTYVNNFGR AEVNLNLAHQ LNEKWSTGLL THGSTLRNRV DKNGDGFLDL PLYAQYNAIN
RWKYQGNKMM AQFGVKALYE DRLGGQKDFE REMKGTTQAY GFGAKVNRYE FFSKIARLFP
EQPYKGLGLI LNASLHDSKS YFGLSNYDGT QKTLYGNLIY QSIIGNTNHS YKTGISYMLD
NYDEVYKNIR LKRNESVPGA FFEYTYNHLD KFVMVAGGRV DFHNLYGTQW TPRLHLKYSL
TDQTTLRASA GRGFRVANPL AEYYGNLVSS RNVTFREAIR PEVSWNYGAS VTQEFKLGEM
SGSFIMDFYR TDFENQLVAD MEDPRYIRFY NLEGKAYANS FQAEANLTPI KRFELKLAYR
LFDVKQTIRD VYDASTLQPR MMVSRDRVLF NAGYALPYDK WKFDATVQWN GKRRLPYMGH
VPDHHVPNNL RSTMSPSFYN LNAQITRTFP KWDIYLGGEN LANFRQKDPI MGAKDPFGQH
FDAGMAWGPV VGRMIYAGMR YKIIR
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