| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3093 |
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| Symbol | |
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| ID | 8226667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3781078 |
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| End bp | 3782787 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644930924 |
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| Product | PA14 domain protein |
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| Protein accession | YP_003087473 |
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| Protein GI | 255036852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCAA AAGTTTCCTG CACGCTGGCG GTGGTTTCGC TGATGCTGGC GGCATTTCAA
ACCCTGCCGG AAAGCGACCT TCGGAAAAAG GCGCCTGTCG CCGAAATGAA CGCGGACGAA
AGACCTGCGG GCATTGAACA CGTGATCGTG ATCGGTGTAG ATGGGCTGAG TCCCGACGGT
ATCCGAAAGG CAGAAACGCC GAGTATCGAC CGGATGGTGG CCAATGGCGC TGTGAAATGG
AATGTGCGGA CGGTGCTGAC CTCGGCGAGC AGCCAAAACT GGGCGTCGAT GATCATGGGC
GCCGGCCCCG AGCAGCATGG CATTATCAAC AACGACTGGG AAATGGACGA CCACTCGCTG
CCGCCCATTG CCCAGGAGGC CGACGGCCGC TTTCCGACCA TTTTCAGCAT TTTGCACAAG
GCAAAACCCG ATGCGGAAAT CGGTGCAGTG TACCATTGGG GCGGTTTTGG GCGGTTGTTC
CAAAAGAATG CGGTCAACTA CGACAAGCAT TTCTCGACAG AGGATTCAAC TGCGGCTGAT
TTTGTCCAAT ACATTAAAAA TAAAAAGCCA ACACTCGGTT TCGTGCATTT CGACCACGTG
GATCATGCAG GCCACCACGG CGGGCACGGC TCGCAGGAAT ACTACCAGTC GGTCACCAAA
GCCGACTCGC TGATCGGGAA AGTGCTTGCC GGTATTCAAG ATGCCGGCAT CGCGGACAAA
ACGCTGGTGA TTCTCTGGGC GGATCACGGC GGCATTGGTT ACGGGCACGG CGGCGCAACG
CCGCAAGAGG CTGAAATAGC CGGCGTTTTG TTCGGGGCTG GTGTGAAAAA AGGCTACGAG
ATTCAGCAAC AGGTTTATAC TTACGACCTT GCTTCGACGA TTGCGTTTGT GCTTGGTATC
GAGCAGCCTT ATGCGTGGAT CGGTCGCCCG GTGAAGCCTG CATTTGCGGG GTTTGACGAA
CCTAAAAATC TCTGGCTCGG CGAAAAAACG GTAAACGCGC CCGTGATCCA TCCCGAAAGA
AAGCTGTATG AGCAGGCAGG AGGGCTTTTT GTGGACAAAC CGGCGACAGT GAGGATCGAT
ACTAAAGCAG AAAAAGGTAC GACGCATTAT ACCATCGACG GTTCTGATCC CGGCCTGAAA
TCGCCGGTTT ACACGCAGCC ATTCAATGTG AGCCAGACGA CCGTCGTCAA AGCGCGCACA
TTTGATGAAA AAGGTAACCC GAGTTTGCTT TCCACTGCGT ATTTTAGGTT GGTCAAATCC
GGGAAGGGCA ATGGAGTGAC CGCCATGTTT TTCAAAGCCA ATGATCTGAA CAAGCTTCCC
GATTTTACCC AGCTTAAAAA CGGGAAGTCG TGGATCGCCC CGGAGTTTGG AATGGTGAAA
AAAGACATTG AAGGCATGCT GGCAAAAGGA ACGGAAAGCT TTGCCATGCA ATTCGAAGGT
TTTATTCAAA TCGACCGGGA AGGGAAATAT CAATTTTCAA CGCAATCAGA CGATGGAAGT
AAGCTTTTTG TGGACGGAAA AGAAGTGGTG AACAACGACG GTAACCATGG TGTAGAGGAA
AAAACAGGCT CCATTGACCT GAAAGCGGGC AGGTATCCGA TTAAAATTCA ATATTACAAT
AACGGCGGCG GCTTTTGGCT CGACGCATTC TATCGCGGTC CGGGCGTTAC CAAGCAACTT
ATCCCGGCCG ATAAGCTCTT TGTGAAATAA
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| Protein sequence | MFAKVSCTLA VVSLMLAAFQ TLPESDLRKK APVAEMNADE RPAGIEHVIV IGVDGLSPDG
IRKAETPSID RMVANGAVKW NVRTVLTSAS SQNWASMIMG AGPEQHGIIN NDWEMDDHSL
PPIAQEADGR FPTIFSILHK AKPDAEIGAV YHWGGFGRLF QKNAVNYDKH FSTEDSTAAD
FVQYIKNKKP TLGFVHFDHV DHAGHHGGHG SQEYYQSVTK ADSLIGKVLA GIQDAGIADK
TLVILWADHG GIGYGHGGAT PQEAEIAGVL FGAGVKKGYE IQQQVYTYDL ASTIAFVLGI
EQPYAWIGRP VKPAFAGFDE PKNLWLGEKT VNAPVIHPER KLYEQAGGLF VDKPATVRID
TKAEKGTTHY TIDGSDPGLK SPVYTQPFNV SQTTVVKART FDEKGNPSLL STAYFRLVKS
GKGNGVTAMF FKANDLNKLP DFTQLKNGKS WIAPEFGMVK KDIEGMLAKG TESFAMQFEG
FIQIDREGKY QFSTQSDDGS KLFVDGKEVV NNDGNHGVEE KTGSIDLKAG RYPIKIQYYN
NGGGFWLDAF YRGPGVTKQL IPADKLFVK
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