Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3087 |
Symbol | |
ID | 8226661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3775314 |
End bp | 3776033 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930918 |
Product | Deoxyribonuclease V |
Protein accession | YP_003087467 |
Protein GI | 255036846 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.674348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGATTA CACCCGAAGT AAATTACGAT CAGCTGACGA TCGGCGAGGC CACGCTCATC CAGCAGCAAC TCCGCTCACA TTTGAAGCTG GAACCCTATC AAAAAGAGCC AAAAACGATC GCCGGTGCCG ATATTTCACT CGCGCTGTAT AGTGAGACCG TTTATGCCGG ACTGGTGGTG CTGAGCTATC CCGATCTTCA ACCAATCGCA TTTTCGCTCG TCAAAAGCAG CACGATATTC CCCTATGTGC CCGGCTACCT GGCTTTTCGC GAAATTCCGG CAATCCTGAA AGCCTATGAA CAGATCCCGG TAAAGCCCGA CCTGATCATG TTTGACGGAA ACGGCATCCT TCACGCACGC CGGATGGGCA TCGCGTCGCA TTTCGGGGTG CTTACCGGCG CTGTTACGAT GGGTTGTGCC AAAAAGAAAC TTGCAGGGCA GTATACCGAG CCCGGCACGA TGAAAGGAGA ATACACGCCC GTTACAGATA AAGGCGAGGT GATCGGCTAT GCACTGAGGA CAAAGGACAA TGTCAAACCC GTTTTCATTT CCCCCGGCCA TCAGATGACG CTCGAAGACA GCCTCACACT CGCACTCAAA TGTACAGGCA AGCACCGGCT CCCCGAGCCC ACACGCCGCG CACACGAGTA CGTGAACCGC TTCCGGACCG GCGAGCTGAC AGAAGGCTAC CACGAAATCA ACACCTGGAA CCTCTTCTGA
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Protein sequence | MVITPEVNYD QLTIGEATLI QQQLRSHLKL EPYQKEPKTI AGADISLALY SETVYAGLVV LSYPDLQPIA FSLVKSSTIF PYVPGYLAFR EIPAILKAYE QIPVKPDLIM FDGNGILHAR RMGIASHFGV LTGAVTMGCA KKKLAGQYTE PGTMKGEYTP VTDKGEVIGY ALRTKDNVKP VFISPGHQMT LEDSLTLALK CTGKHRLPEP TRRAHEYVNR FRTGELTEGY HEINTWNLF
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