| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3072 |
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| Symbol | |
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| ID | 8226646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3752314 |
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| End bp | 3753933 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644930903 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_003087452 |
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| Protein GI | 255036831 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00704051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAT TACAAACACT GGATTATGTC GTCTTCTTCT TTTACTTCAT TGTAGTCTCC
GGTTACGGTT ATTGGATTTA TCAGCGGAAA AAATCAAATG TTGAATCGAC AAAGGACTTC
TTCCTCGCGG AGGGTTCTCT TACCTGGTGG GCTATCGGTG CTTCGCTGAT CGCGTCGAAC
ATTTCGGCGG AACAGTTTAT CGGGATGTCG GGGAACGGCT TTTCGATGGG TCTCGGGATT
TCCACCTACG AATGGATGGC GGCAGCTACA CTGGTGATCG TGGCTGTTTT TTTTATGCCC
ATTTACCTCA AAAACAAAAT TTACACCATG CCGCAGTTCC TGAGCCAGCG GTATAACCAG
TCGGTGAGCT TGATCATGGC TGTGTTCTGG CTCGCGCTGT ATATTCTGGT GAACCTTACC
TCCATTCTCT ACCTCGGGGC ATTGGCGGTT TCGGGTATCT CAGGCCTTGA TTTTCAGCTT
TGTATGATTG CGCTGGCGGT TTTCGCAATT GTGATTACCA TCGGCGGGAT GAAAGTGATC
GGTTTTACGG ACGTGATCCA GGTGTTCTTC CTCGTAATCG GCGGTTTGGC AACTACCTAC
CTGGCGATCA ACCTGGTGTC CGACAATGCG GGTGTTGAAG GTATCGTGCA GGGTTTCAAA
GTAATGCGTG AAAATCACGA CGATCACTTC CATATGATTT TCCCCAAATC GAGCCCGTTC
TATATGCAGC TCCCGGGATT GACGGTGCTG CTTGGCGGGA TGTGGATCGT GAACCTGAAC
TACTGGGGTT GTAACCAGTA CATCACACAA CGTGCATTGG GTGCAGACCT TAAAACGGCG
CGTAACGGTA TTCTTTTCGC CGCATTTTTG AAGCTTTTGA TGCCGGTGAT CGTCGTATTG
CCGGGTATTG CGGCTTACGC ATTGTACAGC AAAGGCATGT TCCAGGCCGA AATGCTGGGT
GAAGATGGCG TGATCAACGC CGATAAAGCC TATCCTGTGC TCCTTAACCT GCTTCCGACC
GGTTTGAAAG GCCTCTCGTT CGCCGCATTG ACGGCCGCTG TTGTAGCTTC CCTGGCCGGT
AAAGCAAACA GTATTTCCAC GATTTTTACC CTGGATATTT TCAAAAACTA CATCGGCAAA
AATGCCGACG AGAAGACGCT CGTGCGCATT GGCCGCGCGG TGGTGGTGAT CTCGATGATC
CTCGCGATTA TCGTTTCTCC TTACATGGGT ATCGACAAAA AGGGTGGTTT CCAATTTATC
CAGGAAATGA CCGGACTTTT GTCGCCGGGT ATTTTCGCGT CGTTCATCAT GGGCTTCTTC
TGGAAACGCA CCAACTCCGC AGGCGCATTG TTCGCGATCG TGGGTGGCTT CCTGATCGCG
CTCGCGATGC ACAACAACTA CTTCCCGTTC GCCGACTGGA CGCAGGTGCC ATTCCTCGAC
CGTATGGGCC TCGTGTTCCT GATTTGCGTG GTGGTAATGT TTATCCTAGG TATGGTAATG
CCGGATGAAA AGAAAGGCCT GGCTATCGAC GCTTCGATGT TTATCCCGCA CCGCAGCTTT
GTAATCGGCG CCGCGGTAGT GATCGCGATC ATTGCCTATT TGTACGGACA TTTCTGGTGA
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| Protein sequence | MQQLQTLDYV VFFFYFIVVS GYGYWIYQRK KSNVESTKDF FLAEGSLTWW AIGASLIASN
ISAEQFIGMS GNGFSMGLGI STYEWMAAAT LVIVAVFFMP IYLKNKIYTM PQFLSQRYNQ
SVSLIMAVFW LALYILVNLT SILYLGALAV SGISGLDFQL CMIALAVFAI VITIGGMKVI
GFTDVIQVFF LVIGGLATTY LAINLVSDNA GVEGIVQGFK VMRENHDDHF HMIFPKSSPF
YMQLPGLTVL LGGMWIVNLN YWGCNQYITQ RALGADLKTA RNGILFAAFL KLLMPVIVVL
PGIAAYALYS KGMFQAEMLG EDGVINADKA YPVLLNLLPT GLKGLSFAAL TAAVVASLAG
KANSISTIFT LDIFKNYIGK NADEKTLVRI GRAVVVISMI LAIIVSPYMG IDKKGGFQFI
QEMTGLLSPG IFASFIMGFF WKRTNSAGAL FAIVGGFLIA LAMHNNYFPF ADWTQVPFLD
RMGLVFLICV VVMFILGMVM PDEKKGLAID ASMFIPHRSF VIGAAVVIAI IAYLYGHFW
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