| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3054 |
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| Symbol | |
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| ID | 8226628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3734865 |
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| End bp | 3735785 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644930885 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003087434 |
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| Protein GI | 255036813 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3622] Hydroxypyruvate isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.237635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGCA GAAATTTTGT AAAATCTACC CTTGGTTTGA CGGGTGCCGC AGTTGCAGCA
GGAGATGCAT TCGCGTCGGC TCCCATGGCT AAAAACAAGT TTAAGCTCAA ATATGCTTCC
CACTTCGGCA TGTTCCAGAA TAGCGCCGGA AAGGATGTGA TCGACCAGCT TAAATTTATG
GCGGATCAGG GGTTTATGGC ATTGGAAGAC AATGGCATGA TGGGCCGTCC GGTGGAGCAA
CAGGAGGCCA TTGCCAAGGA AATGACCCGG TTGGGCATGG AAATGGGCGT GTTTGTGGTA
GATAAGGGCG GTAATGGCGC CAATACGCTC GCCGCAGGCA AAAAAGAATA TATCGACATT
TTCCTTAATG GCTGCAAGAA AGCAGTGGAA GTAGCGAAGC GCGTCAATGC GAAATGGATG
ACCGTCGTTC CGGGTGATTT TGAAAGAAAC CTGCCGATAG GCGTGCAAAC CGGCAACGTG
ATCGACGCAC TGCGCCGTGG TGCCGAAATC CTCGAACCGC ACGGACTCGT AATGGTGCTC
GAACCACTGA GCGACTCCCC GAATTTGTTC CTGAGAACGT CAGATCAGAC CTACGAAATC
TGCCGCGGCG TGAACAGCAA GTCGTGCAAG ATCCTGTACG ATATTTACCA CATGCAGAAA
AACGAAGGCC GCCTGCTTTA CAATATCGAC CAGACGTGGA GCGAGATTGA CTATTTCCAG
ATCGGCGACG AACCCGGCCG CAAGGAGCCC ACAACCGGTG AGATCAACTA CAAGAATGTC
TTCAAATATA TCTACGACCG CAGCAAGAAA GAAGGCAAGT CGTTCATCAT GGGAATGGAG
CACGGCAACT CGAAACAAGG CAAAGAGGGC GAAGAAGCGC TGATCAGGGC GTATGTTGAG
AGTGACAGTT TTGCGATATA G
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| Protein sequence | MLRRNFVKST LGLTGAAVAA GDAFASAPMA KNKFKLKYAS HFGMFQNSAG KDVIDQLKFM
ADQGFMALED NGMMGRPVEQ QEAIAKEMTR LGMEMGVFVV DKGGNGANTL AAGKKEYIDI
FLNGCKKAVE VAKRVNAKWM TVVPGDFERN LPIGVQTGNV IDALRRGAEI LEPHGLVMVL
EPLSDSPNLF LRTSDQTYEI CRGVNSKSCK ILYDIYHMQK NEGRLLYNID QTWSEIDYFQ
IGDEPGRKEP TTGEINYKNV FKYIYDRSKK EGKSFIMGME HGNSKQGKEG EEALIRAYVE
SDSFAI
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