| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3037 |
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| Symbol | |
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| ID | 8226611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3713349 |
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| End bp | 3715559 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930868 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003087417 |
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| Protein GI | 255036796 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.117014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC GATCTACAAC CATCCTCCTA TTCACGCTGG TAAGCCTCTA TCCGGCCCAC
GCCCAGGAAA AGAAACGCGA TTACGATAAA GTTCTTGACC TCAACGAAGT GACGGTAGGG
GAACGCAGAA ACGTAATCCA CACCGAGCGC CTTCCCGATG TGCATAACAC CTACATCACC
GCCGGCAAAA AGAGCGAAGT GATCCATCTT GACGGTGTGA ACGGCAATAT CGCCGAGAAA
ACCGGCCGCC ATATCTTCGC CAAGATTCCC GGCGTGTTCG TGTACGATAT GGATGGCAGC
GGCAATCAAA TCAATATTTC CACGCGCGGC CTCGACCCGC ACCGGTCGTG GGAATACAAC
ATCCGCCAGA ACGGCGTCAT TACCAATTCG GATATGTACG GCTACCCGGC GAGCCATTAC
AGTCCGGCCA TGGAATCCAT TCAGCGGGTG GAGCTGGTGC GGGGAACCTC GTCGCTGCAA
TATGGTGCGC AGTTCGGCGG GATGATCAAT TATGTTACCA AAGGCCCCGA TACCACGAAA
GCATTTACCT TCGAAACGAT CAATTCGGCC GGTTCTTTCG GACTTTTCAG TTCCTACAAT
GCCATCGGCG GCAAGGTGGG TAAGCTTACC TACTCGGCTT ATTATCAGAA GCGCCATTCC
AACGGCTACC GCAAAAATGC GAAGTCCGAC GCGGAGTCAC AGTTTGTAAG TTTGATGTAC
GACATCAGTA AATCATTCCG CATCAAAGCC GAATTGGGGC GTTCCGAATA TGTATACCAA
ATCCCCGGCC CGCTCACCGA TGCGATGTTC CGGCAAGATC CCCGGCAGTC GACGCGCTCG
CGGAATTATT TCAACCCCGA CATTTATGTA CCATCCATCG TGCTGGAATG GAAGGCAAGT
CCGAATACCC AGCTGAAACT CACCACATCC GGCGTTTACG GCGCTCGCAA CAGTGTGATG
TTCGATGCAT TCGCCAATGT GCCCGACACG ATCAGCAGCG TTACTAATGC GTACCGCCCG
CGGCAGGTGG ATATTGATAA TTTCAAAAGC TTTACCTCGG AGTTGCGCCT CGTGCACCAG
TACGATTTGC TCGGCTTCCG GAATGTCGTT TCCGGTGGCA TTCAATACAT GCACAACAAA
CTCCGCCGCC GCCAGCTCGG CAAAGGCACC ACAGGCAGCG ATTTTGACCT GAGCCTTACC
GATCCGCAGT TTGGCCGCGA CATGCGCATG ACCACGGAGA ATGTGGCCGT TTTTGTCGAA
AACCTCATTT TTGTCACGCC CCGGCTCAGT TTCTCGCCTG GCGTGCGGGT GGAGAAAGGC
AGCACGGACA TGACGGGCTG CATCAGCTAC TACGATCCGC AGAACCTTCC CAATTCCATT
CAACACAGCT TTCCGCTGTT CGGGATCAGC TCCCAGTACC GGATCGGCGA GCACAGCCGT
GCGTATGCGG GCTTCTCGCA GGCTTACCGG CCGGTTGTTT TCAAGGACAT TATTCCAGGG
TCGGTTTTGG AAAAAGTGGA TAAAAACCTG AAAGACGCCT ATGGGTACAA CTTCGAAGCG
GGCGTGAGCG GGAGCATCAA AGACGTGCTG CGGTATGATG TGGGGCTGTT TCAGGTGATG
GTCAACCACC GGATGGGCAC CGTAGCGATG AAAGATGAAA ACGGCGCCGC CTATCTGTTC
CGCACCACCA CCGGCGACAG CCGCACCCGC GGCGTGGAGG CCTACCTCGA ATACACCGCT
TACAAACGGT ACAATGGTGG CGAACCCCAG ACCGAGCTCT CATTTTTTAC CTCAACATCC
TGGTTCGATG CCCGATATGT ACGCGGGAAT GCCGTGCAGA ACAATGAGAA CAAAAGTGTG
GCAGGCAACC GCATCGAGGG TGTGCCGACT TGGATTTCGC GGAATGGTAT TCAGTTTCAA
TACAAAAAAC TGTCACTCAC GGCCCAGTAC AGCTACGTAA GTTCCAATTT CGCGAACCCG
CTGAATACCG TGGAGCCTTC GGCCAATGGG ACGATCGGCA AGGTGCCGGG CTACGGACTG
TTGGACCTGA ATGCCACGCT TCACCTGGGC CCAGGCTACA AGCTGCGCGT TGGCATGAAC
AACATCACCA ACAAGCAGTA TTTCACCAAA CGCCCCACAA TGTACCCCGG GGCAGGCGTG
TGGAGCTCCG ACGGAAGGAG TGTAGGCATT TCCTTCGGGA TCAGGATTTG A
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| Protein sequence | MKKRSTTILL FTLVSLYPAH AQEKKRDYDK VLDLNEVTVG ERRNVIHTER LPDVHNTYIT
AGKKSEVIHL DGVNGNIAEK TGRHIFAKIP GVFVYDMDGS GNQINISTRG LDPHRSWEYN
IRQNGVITNS DMYGYPASHY SPAMESIQRV ELVRGTSSLQ YGAQFGGMIN YVTKGPDTTK
AFTFETINSA GSFGLFSSYN AIGGKVGKLT YSAYYQKRHS NGYRKNAKSD AESQFVSLMY
DISKSFRIKA ELGRSEYVYQ IPGPLTDAMF RQDPRQSTRS RNYFNPDIYV PSIVLEWKAS
PNTQLKLTTS GVYGARNSVM FDAFANVPDT ISSVTNAYRP RQVDIDNFKS FTSELRLVHQ
YDLLGFRNVV SGGIQYMHNK LRRRQLGKGT TGSDFDLSLT DPQFGRDMRM TTENVAVFVE
NLIFVTPRLS FSPGVRVEKG STDMTGCISY YDPQNLPNSI QHSFPLFGIS SQYRIGEHSR
AYAGFSQAYR PVVFKDIIPG SVLEKVDKNL KDAYGYNFEA GVSGSIKDVL RYDVGLFQVM
VNHRMGTVAM KDENGAAYLF RTTTGDSRTR GVEAYLEYTA YKRYNGGEPQ TELSFFTSTS
WFDARYVRGN AVQNNENKSV AGNRIEGVPT WISRNGIQFQ YKKLSLTAQY SYVSSNFANP
LNTVEPSANG TIGKVPGYGL LDLNATLHLG PGYKLRVGMN NITNKQYFTK RPTMYPGAGV
WSSDGRSVGI SFGIRI
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