Gene Dfer_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3027 
Symbol 
ID8226601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3705243 
End bp3706100 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content46% 
IMG OID644930858 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003087407 
Protein GI255036786 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTAT TTATATGTTT TGCATCATTG ATTCTTCTGC TCAATTCATG CAATCAGAAA 
CCCCAGCGCA TAAAACAGGA AGCTAACATC ATAAAGTATG GCTCAAATAA CGGGAAATAT
ATAACCATAA ACGATACCAA AATCTACTAT GAAGAATACG GGCAGGGAAT GCCTTTACTG
CTGCTGCATC AGGGGCTCGG CTCGATTGAA AATCTCGCAG GCATCATACC CGAGCTTTCA
AAACATTTCA GGGTTATTGC TCCTGACGCT CCCGGGCACG GGCGGTCCGA GCATGCCGAC
AGTTTGAGCG GAGTGTTGAT GGCGGAATAC TGTTCGCAGC TTATCGACGG GTTGCAGCTT
GATAGCGCCT ATGTAATGGG TTGGAGCTCT GGCGGCAATA CCGCATTGCT GCTTGCCGCA
AACCGGCCCG ACAAAGTAAA GAAAGTGGTG AGCGGAGCCT CCAATTCCAG GGCCAGCGGA
CTCACGCAGG AAGCACGTGA CATGCTAAAA CAATACACGG TTGAAGCCGT GAAAGAGGAT
AAAGATTGGT TGGAAAACTA CCAGCAAATG AACCCGCAAC CGGAAAAATG GATCAAGTTT
TGGGAAGACA ATCAAAAAAT GTGGGAAAGG GAAATCAAAA TTCCCGACGA TAAAATCGCG
GGCATTAATG TCCCTGTGTT ACTTATCCGT GGTGACAAGG ACATGATCAG GCTGGACCAC
ACAATATCCA TTTATCAAAT GCTCCGCCAC GGACAATTAT GCATCTATCC AAACGTCGGA
CATGAAATGC CGGAAGAAAA AGGCGAAATG CTATGCAAAA TCGCTATTGA ATTTCTTCAA
GATAAAAATC TTCAGTAA
 
Protein sequence
MRVFICFASL ILLLNSCNQK PQRIKQEANI IKYGSNNGKY ITINDTKIYY EEYGQGMPLL 
LLHQGLGSIE NLAGIIPELS KHFRVIAPDA PGHGRSEHAD SLSGVLMAEY CSQLIDGLQL
DSAYVMGWSS GGNTALLLAA NRPDKVKKVV SGASNSRASG LTQEARDMLK QYTVEAVKED
KDWLENYQQM NPQPEKWIKF WEDNQKMWER EIKIPDDKIA GINVPVLLIR GDKDMIRLDH
TISIYQMLRH GQLCIYPNVG HEMPEEKGEM LCKIAIEFLQ DKNLQ