Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3020 |
Symbol | |
ID | 8226594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3693050 |
End bp | 3694216 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644930851 |
Product | Exo-alpha-sialidase |
Protein accession | YP_003087400 |
Protein GI | 255036779 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4409] Neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000653205 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.815446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATATT TAAAATACAC GTTGCTGCTG AAATTGTTTG TTATAATGCA TTACGCCATC GGTCAGACGC CCGTTTTCGT GTCGGGGAGT GACGGCTATA AATCGTATCG CATACCCGCG ATCGTGCGTA CGCCTGCGGG CGACCTGCTG GCGTTCGCGG AAGGCAGGGT AGGCGGCAGC GGCGACTTTG GGGACATTGA TATTGTGATG AAACGGAGCA GGGACGGAGG CAAAACCTGG TCTGCAATGC AGGTGGTGGC TAACTATAAC GACTTGCAGG CCGGAAACCC GGCGCCTGTG ATGGACCTCA CGGACCCCGC ATTTCCCAAA GGCAGGCTTT TCCTGTTTTT CAATACGGGC AATAACCACG AAGGCGAAGT AAGGAAAGGC AAGGGCCTGC GCGAAGTTTG GTATAAAACT TCGACAGACA ATGGCGCTAC ATGGAGCGAG CCCGAGAACA TTACCACGCA GGTGCACCGC CCGAAACAGC CCACGGTGAA TGCCGCTTAC GATTTCGCGG AGGATTGGCG GAGCTATGCC AATACGCCCG GCCACGCATT ACAACTCACC GAAGGAAAAT TGAAAGGCCG CATTTACATT CCGGCTAATC ACAGCGCCGG CGATCCGAAA CCGAAATTCA CCGATTACCA GGCCCACGGA TTTTACACGG ACGACCACGG CAAGACGTTC AAACTCAGTG AAACGATCTC CGTGGAAGGC GGCAACGAGG CCACGGCCGC GGAGCTGTCG GGCGGGCGGC TGCTGTTCAA TGCGCGCAAC CAGAAAGGCG ACGTGCGCGC GCGGATCGTA GCGATAAGCT CCGACGGCGG CGCGAAATGG GATACGACGT TTTTTGACCA AAACCTGCCG GACCCCGTCT GCGAAGGTAG CATTCTTACC ATCGGCAAGA GCAAGGGCAA TAACATCCTC GCGTTCTGCA ACGCCGCCGA TACCCAGGCC CGCGACAACC TGACTTTACG CATCAGCTTC GACGACGGGA AAACCTGGGC AAAAAGCTAT CCGGTTGACA AAAGCACGGC GGGAGAAAAG GATTTCACGG CATATTCGGA CATTGTGAAA ACCGGCAAGC AAGCAATCGG CGTCCTGTAC GAGCGCGACG GGTACAAGTC GATCGTGTTC AAAGAAATCC GCTGGGACGC GAAATAG
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Protein sequence | MRYLKYTLLL KLFVIMHYAI GQTPVFVSGS DGYKSYRIPA IVRTPAGDLL AFAEGRVGGS GDFGDIDIVM KRSRDGGKTW SAMQVVANYN DLQAGNPAPV MDLTDPAFPK GRLFLFFNTG NNHEGEVRKG KGLREVWYKT STDNGATWSE PENITTQVHR PKQPTVNAAY DFAEDWRSYA NTPGHALQLT EGKLKGRIYI PANHSAGDPK PKFTDYQAHG FYTDDHGKTF KLSETISVEG GNEATAAELS GGRLLFNARN QKGDVRARIV AISSDGGAKW DTTFFDQNLP DPVCEGSILT IGKSKGNNIL AFCNAADTQA RDNLTLRISF DDGKTWAKSY PVDKSTAGEK DFTAYSDIVK TGKQAIGVLY ERDGYKSIVF KEIRWDAK
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