| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3017 |
|---|
| Symbol | |
|---|
| ID | 8226590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3690296 |
|---|
| End bp | 3691612 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644930847 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_003087397 |
|---|
| Protein GI | 255036776 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1078] HD superfamily phosphohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00000311981 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCAA ATCTCCAAAC TAATACAACA AGAATAGCTT CTTTTGTCCG TTGCTTGTTT
ATTACTTTTG CCAAAAAATT GGTTTTGAAT AAAAGGAAAA TCATCAACGA CCCGGTTTAC
GGGTTTATTT CCATCGCTTC GGATCTGCTC TACGATCTGG TGGATCATCC TTATTTTCAG
CGACTCCGGC GGATCAGGCA GCTTGGCCTG GCCGATATCG TTTACCCCGG TGCCCTTCAC
ACGCGTTTTC ACCATGCATT GGGCGCCATG CACCTGATGA GCCAGGCTTT GCGCGCGTTG
CAGGAAAAAG GACATATGAT ATGGGAGCCG GAGCTGGAAG GGGCGCAGGC GGCGATTTTG
CTGCACGATC TCGGGCACGG TCCGTTTTCA CATGTACTGG AAAGTGTGGT GATCCCCGGC
GTGCACCACG AGGCGATTAC CCTCGCGATG ATGAAAGACC TGAACCGCCA GATGAACGGA
AGGCTTGATA TTGCCATCCA GATGTTCGAA GGCACCTATC CGCGCCGGTT TTTTCACCAG
ATGGTGTCGA GCCAGCTCGA TATGGACCGG ATGGATTACC TGAACCGGGA CAGCTTCTAC
ACGGGCGTGA TCGAAGGTTC CATTGGAGCC GACAGGTTGA TCAAAATGCT GGATATCAGC
AAAGACCAGC TGGTGGTGGA GGAAAAAGGA CTCCTGAGCA TTGAAAACTT CCTGCACGCG
CGCAGGCTCA TGTACTGGCA GGTGTACCTG CATAAAACGC TCCTGAGCGC GCAGGCGATG
CTCACGCAGA TCATGTACCG CGCCCGCGAA CTGGCAGCAG CCGGCGAGCA GCTCTTCGCG
ACCCCCGATT TCAAGCGCTT CCTTTATAAC CGCTTTACCC TGGCGGATTT CGACAATCAG
CCGGATTTAC TGGCCGCATT CAACGGGCTC GATGATAACG ATGTGTGGGC ATCCGTAAAA
GGATGGAGAA CGCATCCCGA CCCGGTGCTG TCGACGTTGT GCGAAATGCT TTTGGATAGA
AAACTCTTTA AAATCAGCTT TTTTAACGAG CCGCCCGGAG AGGAAACGCT GGCCCCGCTC
CGTGAGCATC TTAATGCAAA GGGCGTTGCG GAAACGGACA TGCAATACTT CCTCATTACA
GGCGAAACCA CCAATTGGGC GTATGCCAAA GAGCAGGACC CGATCCGCGT GAAAATGAAA
AGCGGAAGTT TGGTGGATAT AGCCGACGCG TCCGACATTC CGACCATCGA AGCCCTTACT
AAGATTGTAC GCAAGTACTA TGTATGTTGG GGTAAAAATG TATCTTTGCG TGGTTAA
|
|---|
| Protein sequence | MRSNLQTNTT RIASFVRCLF ITFAKKLVLN KRKIINDPVY GFISIASDLL YDLVDHPYFQ
RLRRIRQLGL ADIVYPGALH TRFHHALGAM HLMSQALRAL QEKGHMIWEP ELEGAQAAIL
LHDLGHGPFS HVLESVVIPG VHHEAITLAM MKDLNRQMNG RLDIAIQMFE GTYPRRFFHQ
MVSSQLDMDR MDYLNRDSFY TGVIEGSIGA DRLIKMLDIS KDQLVVEEKG LLSIENFLHA
RRLMYWQVYL HKTLLSAQAM LTQIMYRARE LAAAGEQLFA TPDFKRFLYN RFTLADFDNQ
PDLLAAFNGL DDNDVWASVK GWRTHPDPVL STLCEMLLDR KLFKISFFNE PPGEETLAPL
REHLNAKGVA ETDMQYFLIT GETTNWAYAK EQDPIRVKMK SGSLVDIADA SDIPTIEALT
KIVRKYYVCW GKNVSLRG
|
|---|
| |