| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3016 |
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| Symbol | lpxD |
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| ID | 8226589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3689174 |
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| End bp | 3690214 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644930846 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_003087396 |
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| Protein GI | 255036775 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000235003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTA CTGTCAGCGA GATTGCTCAG ATGCTGAATG GAACTGTTGT TGGAAATGAT
CAGATTACAA TTAATTCGGC TGCAAAAATT GAAGAGGGCA TGCCGGGTTG TATTTCTTTT
CTGGCCAACA GCAAATATGA GCATCATATC TACACTACAC AGTCTTCGGC AGTAATTGTC
AATAAGGATT TTGTCCCAAA AAAAGATATT CCTGCGACGT TGATCTACGT CGATAATGCC
TATACCGCTT TCACCATCCT GCTGGAAGAA TACCAGAAGC GCCTCGCAGG CATCAAAACG
GGTGTGGAGC AGCCGAGTTT TATCGGTGAA AACAGTGAAA CCGGCGAAAA CTGCTACCGC
GGGGCATTTT CATACATCGG GAAAAATTGC GTGATCGGTA AGGAAGTGAA GATTTACCCG
CAAGCCTGGC TGGGCGACGG CGTCGAGGTC GGCGATTATT CGGTGATCCA CCCGGGGGTG
AAGATTTACG ATAACACGGT GATCGGTAAA AACGTCACAA TTTTTGCCAA TACGGTGATC
GGCAGCGACG GTTTCGGTTT CGCACCGCAG GCCGACGGCA GCTACAAGAC GATCCCGCAA
CTCGGAAATG TGATTATCGA GGATAATGTC AGCATAGGGG CCAATGCGAC GATCGATTGC
GCCACGATGG GTTCGACGAT TATCCGCCAG GGAGCGAAAA TAGATAACCT GGTTCAGATC
GCACATAATG TAGAGATTGG AAAAAATACC GTAATTGCGG CCCAGTCCGG CGTATCCGGC
TCCACCACTA TCGGCGAACA ATGCGTGATC GCCGGGCAGG TTGGCGTGGT AGGGCATATT
ACGGTAGCAA ACAATACCAA AGTGGGCGCA CAAAGCGGGT TGGCCAAATC CATTAAAAAG
GAAGGGCTGT CGCTTTCGGG CTCACCTGCC AGGGACCTGA ACGAACATTT ACGGTCCATG
GCACTGGTGC GAAGGCTGCC TGAGCTGGAA GAACGACTGA AAGACCTGGA ACGCAAACAG
GAAACTTCCG ATTTTCAGTA A
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| Protein sequence | MKFTVSEIAQ MLNGTVVGND QITINSAAKI EEGMPGCISF LANSKYEHHI YTTQSSAVIV
NKDFVPKKDI PATLIYVDNA YTAFTILLEE YQKRLAGIKT GVEQPSFIGE NSETGENCYR
GAFSYIGKNC VIGKEVKIYP QAWLGDGVEV GDYSVIHPGV KIYDNTVIGK NVTIFANTVI
GSDGFGFAPQ ADGSYKTIPQ LGNVIIEDNV SIGANATIDC ATMGSTIIRQ GAKIDNLVQI
AHNVEIGKNT VIAAQSGVSG STTIGEQCVI AGQVGVVGHI TVANNTKVGA QSGLAKSIKK
EGLSLSGSPA RDLNEHLRSM ALVRRLPELE ERLKDLERKQ ETSDFQ
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