| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3006 |
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| Symbol | |
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| ID | 8226579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3672853 |
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| End bp | 3674478 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644930836 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_003087386 |
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| Protein GI | 255036765 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCA CGTCCGTTTT TGCGCAAACT CCCAAGAAAG CTACCCCCGC AAAGGCATCA
GCCCTGGCCC GCCCCAAACT CGTTGTCGGA ATTGTTGTAG ACCAGATGCG GTACGATTAC
CTGTATCGCT ACTACGATCA GTACACCGAG GGAGGTTTCA AGCGGATGAT GAACGAAGGT
TTCAACTGCC GCAATAATCA TTACAGCTAT GCATTGACCG TCACTGCCGC GGGGCACGCG
TCAGCGTACA CGGGCTCTAT TCCGGCGATC AACGGGATTG TGGGTAACGA ATGGTATGAC
CCCATTGCGA AACAGGATGT GTATTGCGTG GAAGACAGCA CCGTGAAAAC TGTGGGCAGC
AACAATGTGA CGGTAGGCAA AATGTCGCCC AGAAACCTGC TGGTAAGCAC CATCACCGAT
CAATTGCGCA TTGCAACTAA CTTCCGTTCG AAAACGATCG GCGTAGCCAT TAAAGACCGC
GGCTCCATCC TGCCTGCTGG TCACGCTGCG AATGCGGCCT ACTGGTTTGA TTCGAAAACC
GGAAACTGGG TGACAAGCAC CTATTACATG GACGACCTGC CGCAATGGGC CAAGGATTAC
AACGCGAAGA AAATGCCCGC GGAATATTTG AAAAAAGGCT GGGAATTGTT GCTGCCGGCA
GAGGCTTACA CCCAGAGCTC GCCCGACGAC GTAGCCTGGG AGGGTAAATT GCCGGGAGCC
AAAAGACCCG TGTTTCCGTA CGAATTGATG GGAATGTCGG GTGATGCTTT CGGCATTGTG
ACCGACACGC CCTGGGGCAA TACGATCACC AAAGAAATGG CGATCGAGGC GATCAAGGGC
GAGCAGCTGG GCAAAGGCAA GGATACCGAT TTTCTGGCGA TCAGTTTCTC GTCGACAGAC
AAGATCGGGC ACCGCGCAGG ACCCAATTCC ATTGAGCAGC AAGACGACTT CCTGCGCCTG
GACCGCGAGT TTGCCGACTT GTTCAACTTC CTGGACGGCT GGGTTGGAAA AGGCCAATAC
ACCGTTTTCC TCACCGCCGA TCACGGGGTA GTGGATGTGC CGGGTTTCGC GCAGGAGCAC
AAGCTGCCGG CCGGACTGGT AGATCGTAAA CTGCTCACCG GCGCCGTTAC GGAGGCATTG
AACGAAGCAT TTGGCAAAGA CAAATATGTG GTCGCTACCG ACAACAACCA GCTGTATTTC
GACCACAGCC TTTTGAGGAA GAAAAACATT ACCATAGCGG CCGTTCACGC CGTGGTGCGC
GACGCTGCAT TGGCTGTGCC GGGTATTGCC GACGTAATCG ATCTGCACGA CATGGGCAAG
GCGCCATTGA ATACCTACCA GCTGGAACTT TACAAAAACA ATGTGAATGC AAAACGTAGC
GGCGACTTGC AGGTCATTTC GCAGCCGGGC TGGTTTTACG GTACTTCCAC CGGAACCTCG
CACGGCACGC CCTACAACTA CGATACGCAG GTGCCGTTCG TGATGTTCGG GTGGGGTATC
AACAAAGGGG AAACCGTGAA GCGGACATCG GTGAGCGACA TTGCGCCCAC CATTGCTGCA
TTGCTGCATA TCCTCCCGGG CAGCGGGAAT ATCGGACTGC CGGTAGAGGA AGCACTGAAA
AAGTAA
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| Protein sequence | MATTSVFAQT PKKATPAKAS ALARPKLVVG IVVDQMRYDY LYRYYDQYTE GGFKRMMNEG
FNCRNNHYSY ALTVTAAGHA SAYTGSIPAI NGIVGNEWYD PIAKQDVYCV EDSTVKTVGS
NNVTVGKMSP RNLLVSTITD QLRIATNFRS KTIGVAIKDR GSILPAGHAA NAAYWFDSKT
GNWVTSTYYM DDLPQWAKDY NAKKMPAEYL KKGWELLLPA EAYTQSSPDD VAWEGKLPGA
KRPVFPYELM GMSGDAFGIV TDTPWGNTIT KEMAIEAIKG EQLGKGKDTD FLAISFSSTD
KIGHRAGPNS IEQQDDFLRL DREFADLFNF LDGWVGKGQY TVFLTADHGV VDVPGFAQEH
KLPAGLVDRK LLTGAVTEAL NEAFGKDKYV VATDNNQLYF DHSLLRKKNI TIAAVHAVVR
DAALAVPGIA DVIDLHDMGK APLNTYQLEL YKNNVNAKRS GDLQVISQPG WFYGTSTGTS
HGTPYNYDTQ VPFVMFGWGI NKGETVKRTS VSDIAPTIAA LLHILPGSGN IGLPVEEALK
K
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