Gene Dfer_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3004 
Symbol 
ID8226577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3671431 
End bp3672342 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content53% 
IMG OID644930834 
Productband 7 protein 
Protein accessionYP_003087384 
Protein GI255036763 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTT TCATTGTTCT GCTCGTACTG GTGGTACTCA CCATTCTGAT GACCGTGAAG 
GTCGTCCCAC AGCAAAGTGC TTATATTCTG GAACGTCTGG GAAAATTTTA CGCCGTGCTT
CAACCGGGCG TCAATTTCAT CATTCCCTTC TTCGACCGGA TTGCTTATAA GTACACCCTT
AAAGAAGCCG CTGTGGACAT CCCCGAGCAG ATCTGTATCA CCCGCGACAA TGTGCAGGTG
CGCATGGACG GGGTCATTTT TATACAAGTA ATAGACCCCA GAAAAGCGGC CTACGGCATT
TCGGACTACA CTTTTGCGGT GATACAATTA GCACAAACCA CCATGCGCAG CGAGATTGGG
AAACTGGATC TGGATAAAAC TTTCGAAGAA CGTATGACTA TTAACCGTGC CGTGGTGGAA
TCGATCGACG AGGCGGCTAC GGGCTGGGGC GTGAAAGTGC TTCGCTACGA AATCAAGAAC
ATTACGCCGC CGCAAAGCGT GTTGAACGCA ATGGAGAAAC AAATGCAGGC CGAGCGTGAA
CGCCGCGCCG TGATCCTGCA ATCGGATGGT GAAAAGCAGG CGGCCATTAA TGTGGCCGAG
GGACAGAAAC AGAAAGTCGT GCTCGAATCG GAGGGTATCC GGCTGCGGCA GATCAACGAG
GCGGAAGGGG AAGCCGCTGC ATTGAAATCG GTGGCCGAGG CCACGGCAGA AAGTATCCGG
CTTGTGGCGC AGGCCATTCG TGAAGACGGC GGTTCGGAAG CCGTGCAGCT GAAAGTGGCC
GAAAATTATG TGGAGCAGTT TGGAAAACTC GCCAAAGCCG GCAACACGCT CATTCTCCCC
GCCAACCTGG CCGATATGGG CTCCCTGATC GCGACCGCAT TAACCGTCAT CAAATCTGAA
CCGAAGAAAT AG
 
Protein sequence
MTPFIVLLVL VVLTILMTVK VVPQQSAYIL ERLGKFYAVL QPGVNFIIPF FDRIAYKYTL 
KEAAVDIPEQ ICITRDNVQV RMDGVIFIQV IDPRKAAYGI SDYTFAVIQL AQTTMRSEIG
KLDLDKTFEE RMTINRAVVE SIDEAATGWG VKVLRYEIKN ITPPQSVLNA MEKQMQAERE
RRAVILQSDG EKQAAINVAE GQKQKVVLES EGIRLRQINE AEGEAAALKS VAEATAESIR
LVAQAIREDG GSEAVQLKVA ENYVEQFGKL AKAGNTLILP ANLADMGSLI ATALTVIKSE
PKK