| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3001 |
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| Symbol | |
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| ID | 8226574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3665738 |
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| End bp | 3667054 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644930831 |
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| Product | nucleotide sugar dehydrogenase |
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| Protein accession | YP_003087381 |
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| Protein GI | 255036760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTG CAGTAGTAGG AACAGGATAC GTCGGTTTGG TGACAGGTAC CTGCTTTGCC
GAGACCGGCA ACCAGGTAAC ATGCGTAGAC ATCGACGTCA GGAAGGTGGA ACGCCTTCAA
AAAGGAGAAA TACCCATTTA CGAGCCCGGC CTCGACGTGC TTTTCGACCG CAATGTGGCT
GAGGGGCGCT TGTTGTTTAC TACCAACCTG GCCGAAGGTA TCAAAGATGC GCAGGTGATT
TTCCTGGCAT TGCCCACGCC TCCGGGCGAG GACGGCTCTG CCGATCTCAA ATATATCCTG
AAAGTAGCCG ACGACCTAGG TCCGATCCTC GATCAGTACG CGGTGATCAT CGACAAGAGC
ACCGTGCCCG TAGGAACAGC CGAGAAAGTG CGTGCTGCGG TTGCTAAGAA TGCCAAAGTG
GACTTCGATG TGGTGTCCAA CCCAGAGTTC CTTCGCGAAG GTGTTGCGGT GGAAGATTTC
ATGAAGCCCG ACCGCGTGGT GGTGGGTACA ACCTCGGAAA AAGCCAAAAA GGTGATGGAG
AAACTCTACG CTCCACTGGT GCGCCAGGGT AACCCGGTGA TCTTTATGGA TGAGCGCTCG
GCCGAGATGA CCAAATATGC GGCCAACTCG TTCCTGGCGA TGAAGATCAC GTTCATGAAC
GAAATCGCGA ACCTTTGCGA GAAAGTAGGT GCCAATGTGG ACGATATTCG TCGTGGTATC
GGAACCGACA GCCGTATCGG CAAGCGCTTC CTTTTTGCGG GGATCGGCTA CGGTGGCAGC
TGTTTTCCTA AGGACGTTCA GGCTTTGGCT AAAACTTCAA AGGATTACGA CTACGACTTC
CGCATTCTGA AATCGGTGAT GGATGTGAAC TACGATCAGA AGAAGAAATT GCTTCCGATG
GTAGAAAACT ACTTCACCGA CGGCCTGAAA GGCAAAACGA TTGCAGTATG GGGATTGGCA
TTCAAGCCTT ATACCGACGA TATCCGTGAA GCGCCAGCAT TGGAAAACAT CGAAGCATTG
CTTGAAGCAG GCGCCAAAGT GGTAGCTTAC GATCCGGAAG CGATGACGAA TGTGAAAGGC
ATTCTGGGAG ATAAAATCAC ATTTACCCAC ACGCCTTACG CAGCGCTCGA CGACGCGGAT
GCATTGATGA TCTTTACCGA ATGGCCTCAG TTCCGCACGC CGGAATTTGA AAAAATGGGT
AAGCTGCTGA AAAATAAAGT CGTTTTCGAC GGCAGAAACC TGTACGAACT CGATCAGATG
CGCGAAATGG GTTACACCTA TTACAGCATC GGTCGCGAGA AGGTGGTGCC GGCCTGA
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| Protein sequence | MKIAVVGTGY VGLVTGTCFA ETGNQVTCVD IDVRKVERLQ KGEIPIYEPG LDVLFDRNVA
EGRLLFTTNL AEGIKDAQVI FLALPTPPGE DGSADLKYIL KVADDLGPIL DQYAVIIDKS
TVPVGTAEKV RAAVAKNAKV DFDVVSNPEF LREGVAVEDF MKPDRVVVGT TSEKAKKVME
KLYAPLVRQG NPVIFMDERS AEMTKYAANS FLAMKITFMN EIANLCEKVG ANVDDIRRGI
GTDSRIGKRF LFAGIGYGGS CFPKDVQALA KTSKDYDYDF RILKSVMDVN YDQKKKLLPM
VENYFTDGLK GKTIAVWGLA FKPYTDDIRE APALENIEAL LEAGAKVVAY DPEAMTNVKG
ILGDKITFTH TPYAALDDAD ALMIFTEWPQ FRTPEFEKMG KLLKNKVVFD GRNLYELDQM
REMGYTYYSI GREKVVPA
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