Gene Dfer_2976 details

Gene Information

• Locus tag: Dfer_2976
• ID: 8226549
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dyadobacter fermentans DSM 18053
• Kingdom: Bacteria
• Replicon accession: NC_013037
• Strand: +
• Start bp: 3640926
• End bp: 3644363
• Gene Length: 3438 bp
• Protein Length: 1145 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644930806
• Product: protein of unknown function DUF1080
• Protein accession: YP_003087356
• Protein GI: 255036735
• COG category: [C] Energy production and conversion
• COG ID: [COG1413] FOG: HEAT repeat

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.657239
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAAA GACTACACCA TATTCTGGCC CTCTGCCTGG CTTCCTCGCA GCTCATGGCC 
CAAACCGACA ATGCGCTCGA CGCCAAGGTG AAGGCGGTAT TGTCGAAATT CCCCTCGCAA 
AACGAGGCCG CATTGAAGAA AAACATGGAA GAACTGGCGC AGCTCGGCAA ACCGGGCCTT 
GTACAGATCG CCTCCATGCT CACGCCTCCC GGCAAGGGCG ACAATACAAA AATCCAGTTC 
GCATTGGGCG GATTCAGCTA TTATGCTTCG CAGGCAGGTA AAGAGGCGTT GCGCAAGGAC 
GCCGCCGAAG CCTATGGCGA AGCATTGTCC AAAGTAGCCG ACCCTGATAG CAAGAACTTC 
CTCATTTACC AGCTCCAAAC GGTTGGTAGA GACGAATCGG TGGATGTTTT GAAAGGTTAT 
CTCAAAGATG AAAGACTTTC ACAACCCGCC GCCCGGACGC TCTCGCGCAT TGGCTCGCCT 
GCTGCCGGTG CCGCATTGCT GCAAGCGCTG GGGAATGCCG GCGGAAGCGT GCAGCTTGCC 
ATTACCGAGG CATTGGGGGA TGTTCATTAC AAAGAAGCCG CACCGGCTAT CGAAAAAACG 
GCAGCCAGCG CTGAGTCGGA CCTCCGAAAG GTGAGCCTTT ACGCCTTGTC TGAAATAGGC 
GTTCCTTCTT CCGAAAATAC GCTGGCAAGT GCCGCTCAAA AAGCATCCTA CCGCTACGAC 
GTGACGGATG CAACGGCCGT TTACCTCAAA TATCTGGCAA AACTAGCCGC CAACGGCCAT 
GGAGCTACGG CTGAAAAAGC GGCGCTCGCG TTGATAAAAG CTACGCCCGA CGTTAAGCAA 
TCGGCCACGC GTTCTTCGGC ATTGAAGATT TATTCGGATA TCAAAAAGCG GGAATCCGTG 
CCGGTGCTCG TCAGTGCCCT GCAAAGCACC GACGCGCAAT ATCGCGCAGC GGCATTGAAA 
CTCGGACAGA AATACCTCAT GGCCGACGGC ACCACGCCCT GGCTGAATGC ATTCAAAAAA 
GCAAATCCGA CGGTTCAGGC GGAGATTATC ACCATGCTTG GCCATGCCGA ATCGAAAGAC 
GCATTGCCTC TTGTACTGAA AGCACTTTCC TCGAAAGACA ACAAAGTAAA AACAGCTGCA 
ATATGGTCGG CGGGCAGAAT CGGGCAGGAA AGCAGCATTG CAAAACTGAT CCCGGTTTTG 
AAAACGGCCA ATGCCGACGA AATTGCAGCG GTAAAAAGCA GCTTGCTGAC CATTAAAGGC 
GCCTCGCTGG CGGACCAGGT GGCTGCGGCC ATTCCCCGCG TACCAGCCCC CGCACAAGCC 
GCGCTGATCG ACGTGCTCGC GGCCCGCGCC GCCACTTCGA AACTGCCGGT AGTATCGGCG 
CAGTTAAAAA GTGCTGATGC GGATGTGCGA AAATCTGCAT TCAATGCATT AAAATCCCTG 
GCAACCGCCA ACGACCTGCC GCAGCTTTAT GCGCTGCTCA ATGGTGGCGG CTCGGCCGAG 
GAAATTGCGG CTACACAGGC TGCTATCGGC GCGGCGATCA AAGAAAGCGG CGATACCAAC 
AGCCAAACAG AAGCGATCCT GAAACAAATG CAAGCCTCGC CCGCCGACAA ACAAGGCAAT 
TACCTGGCGG TACTGGCCGG CATTGGCGGT AAAAAAGCGC TAGCCGCGGT GGTAACAGCT 
TACGGAAACG GTGATGCGGC TAAGAAAAAG TCCGCCATCG CAGCGCTTTC CGCCTGGGCG 
GACGCAAGCG CAGCGAAAGA GCTCCTTTCA ATCGCCGGCA GTACCAGCGA TACCGACGAT 
TTTCAGACCG CATTGACAGG CTACGTGTCT GCCGCTTCAA AATCCGGCAA AACGCCTGCC 
AACAAGGTAC TGATGCTCCG TGAGGCGCTT GCCATTGCCA AAACGGATGC GCAGAAAGAA 
GCGATCATTA AAGAGTTGGG ACGAAACAGG ACTTTCAATT CCCTCCTGCT GGTGGGCAAA 
TACCTGGATA ATGCAGGTAC GCAGCAAGCC GCTGCCCAGG CTGTGATGAG CATTGCGCTG 
GCTAACAAAA ACCTGTACAG CACCGAAATC CGCGCGCTGC TCACCAAGGC CGGACCGCTT 
CTGAAAGGTC AGGATGCCGA TTACCAGCGG GAATCGATCC GTAAGCATTT GGCCGAAATG 
CCGGCTGGCG AAGGATTCGT GTCGCTGTTT AACGGCAAAG ACCTCTCGGG CTGGAAAGGT 
TTGGTCCAAA ACCCAATCGC CCGCCGCAAA ATGAGCGCCG ATTCGCTGGC CTACAAGCAG 
AAAAAGGCGG ATGAAGCGGC ATTCAAGGAT TGGTTCGCAA AAGACGGCGA GCTGGTTTTC 
TCCGGTCATG GCGATAACCT TTGCACGGCA AAACAATACG GCGATTTCGA AATGTACGTG 
GATTGGAAAA TCCAGAAAGA CGGTGATGCG GGCATTTACC TGCGTGGGAC GCCGCAGGTG 
CAGATATGGG ACACCTCGCG CGTAAGCGTT GGCGCGCAAG TGGGTTCGGG CGGACTTTAT 
AACAACCAAA AGAACCCCAG CAAGCCGTCC AAAGTAGCGG ATAATGCCAT TGGAGAATGG 
AACACCTTCC ACATTACGAT GATCGGCGAC CGCGTGTCTG TGGACCTGAA TGGGGAAAAC 
GTGGTGGATA ATGTGGTACT GGAAAACTAC TGGGACCGCA ATCTGCCGAT TTTTGCCAAG 
GAGCAACTCG AATTACAGGC GCATGGCAAC GAAATCCATT ACCGCGACAT TTACGTTCGG 
GAAATCCCGC GTCCAGAGTT TACATTGCCC GAAGTTGAGC AGCAAGACGG CTTCAAGGTT 
CTTTTCGATG GCACAAATAT GTTTGAATGG GTTGGCAACA AAACCGACTA CTTCATCCAG 
AACGGTGAAC TGGTGGTTGA TCCTAAAAAA GGCGGCAAAG GCAATCTCTA CACCAAGGAC 
GAGTATAGCG ACTTTGACTT CCGTTTTGAA TTCCAGCTTA CGCCGGGTGC GAACAACGGT 
CTGGGCATCC GCACACCGAT GGAAGGCGAC GCCGCCTACG TGGGTACCGA AATCCAGATC 
CTCGACAATG ACGCCGAGAT TTACAAGGAC TTGAACGAAT ACCAATACCA CGGCTCGGCC 
TATGGCATTA TTCCCGCAAA AAGAGGCTTC CTCAAACCCA TGGGCGAATG GAATTACCAG 
GAAGTGAGGG TGCAGGAATC GAAAATAAAA GTAACCCTGA ACGGCACCGT GATCCTCGAT 
GGCGACCTCG CCGAAGCCAG CAAAAACGGC ACGGTAGACC ACAAAGACCA CCCGGGATTG 
AAACGAACAA GCGGCCACCT CGGATTCCTC GGACACGGTT CCGAACTGAA ATTCAGGAAC 
ATCCGCATTA AAGACCTGAG TAAAGCGGCG CCGGAGCCGG TGGAAACAGG GAAGAAAAAA 
AGTAAAAAGA AAAAGTGA 

 

Protein sequence

MKKRLHHILA LCLASSQLMA QTDNALDAKV KAVLSKFPSQ NEAALKKNME ELAQLGKPGL 
VQIASMLTPP GKGDNTKIQF ALGGFSYYAS QAGKEALRKD AAEAYGEALS KVADPDSKNF 
LIYQLQTVGR DESVDVLKGY LKDERLSQPA ARTLSRIGSP AAGAALLQAL GNAGGSVQLA 
ITEALGDVHY KEAAPAIEKT AASAESDLRK VSLYALSEIG VPSSENTLAS AAQKASYRYD 
VTDATAVYLK YLAKLAANGH GATAEKAALA LIKATPDVKQ SATRSSALKI YSDIKKRESV 
PVLVSALQST DAQYRAAALK LGQKYLMADG TTPWLNAFKK ANPTVQAEII TMLGHAESKD 
ALPLVLKALS SKDNKVKTAA IWSAGRIGQE SSIAKLIPVL KTANADEIAA VKSSLLTIKG 
ASLADQVAAA IPRVPAPAQA ALIDVLAARA ATSKLPVVSA QLKSADADVR KSAFNALKSL 
ATANDLPQLY ALLNGGGSAE EIAATQAAIG AAIKESGDTN SQTEAILKQM QASPADKQGN 
YLAVLAGIGG KKALAAVVTA YGNGDAAKKK SAIAALSAWA DASAAKELLS IAGSTSDTDD 
FQTALTGYVS AASKSGKTPA NKVLMLREAL AIAKTDAQKE AIIKELGRNR TFNSLLLVGK 
YLDNAGTQQA AAQAVMSIAL ANKNLYSTEI RALLTKAGPL LKGQDADYQR ESIRKHLAEM 
PAGEGFVSLF NGKDLSGWKG LVQNPIARRK MSADSLAYKQ KKADEAAFKD WFAKDGELVF 
SGHGDNLCTA KQYGDFEMYV DWKIQKDGDA GIYLRGTPQV QIWDTSRVSV GAQVGSGGLY 
NNQKNPSKPS KVADNAIGEW NTFHITMIGD RVSVDLNGEN VVDNVVLENY WDRNLPIFAK 
EQLELQAHGN EIHYRDIYVR EIPRPEFTLP EVEQQDGFKV LFDGTNMFEW VGNKTDYFIQ 
NGELVVDPKK GGKGNLYTKD EYSDFDFRFE FQLTPGANNG LGIRTPMEGD AAYVGTEIQI 
LDNDAEIYKD LNEYQYHGSA YGIIPAKRGF LKPMGEWNYQ EVRVQESKIK VTLNGTVILD 
GDLAEASKNG TVDHKDHPGL KRTSGHLGFL GHGSELKFRN IRIKDLSKAA PEPVETGKKK 
SKKKK