| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2974 |
|---|
| Symbol | |
|---|
| ID | 8226547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3637873 |
|---|
| End bp | 3639432 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644930804 |
|---|
| Product | carboxyl transferase |
|---|
| Protein accession | YP_003087354 |
|---|
| Protein GI | 255036733 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCC GATCAGCCGC TGCTTCAAAA AAAGAACTTT TAGATCAAAA AAATGCCGAG
GCCGAACTCG GGGGCGGTGA AAGCAGGATT CAGGCGCAAC ATGCAAAAGG TAAACTTACA
GCCCGGGAAC GCATCGCGAT CCTGCTCGAC AAGGGTTCTT TTGAAGAAAT AGGCCGGTTT
GTGATGCACC GCAGCAAGGA TTTCGGACTC GACAAGGAGC ATTACCTCGG CGACGGCGTG
GTAACCGGCT ACGGCAAAGT GAATGGCCGG CTGGTGTACG TTTTTGCGCA GGATTTCACG
GTTTTCGGCG GGTCGCTGTC GGAAACGCAT GCTGAAAAAA TCTGTAAGAT CATGGACCTG
GCCATGAAAA ACGGCGCTCC GCTGATTGGA TTGAACGATT CGGGCGGCGC GCGGATTCAG
GAAGGCGTGC TGTCGCTGGC GGGGTATGCC GATATTTTTT ATAAAAACAC ATTGGCCTCG
GGCGTGATCC CTCAGATTTC GGCAGTAATG GGCCCCTGCG CGGGCGGGGC CGTGTATTCG
CCTGCGATCA CCGATTTTAT CTTAATGGTT GAAAACACGA GCTACATGTT CGTGACGGGG
CCTAATGTGG TAAAAACCGT GACGCACGAG GAAGTGACGG CCGAAGAACT CGGCGGAGCC
ATGACCCACG CTACCAAATC GGGCGTGACG CACTTTGTCT CTGCCAATGA GGTCGAATGC
CTGCAAGCGA TCAAAAAGTT GCTGAGCTAC ATGCCCCAGA ACTGCGAGGA CGAGGCGCCG
CGGCAGCCCT ACACACCCGG CGACGAGCTG CGTCCCACCC TGAATACCCT CATTCCCGAA
AGCGCCAACC AGCCTTACGA CATGCGGGAA GTTATTACAG AGCTCTCCGA TCCCGACAGT
TTTTTTGAAG TACATGAAAA TTTCGCCGAA AATATCGTCG TAGGCTTTTC CCGCATTGCT
GGGCGCAGCA TTGGTATTGT AGCCAACCAA CCTGCGGTAC TGGCCGGCGT GCTCGACATT
CACGCAAGCC AGAAAGCCGC CCGTTTCGTG CGTTTTTGTG ATAGTTTCAA CATTCCGCTA
CTGGTTTTGG AAGATGTTCC CGGCTTCCTG CCCGGCACCG ACCAGGAGTG GAATGCGATT
ATTACCAACG GCGCCAAGCT GCTCTACGCG TTCTGCGAAG CCACGGTGCC GCGCATTACG
GTAATTACGC GCAAGGCCTA CGGAGGCGCG TACGATGTGA TGAACTCGAA ACACATCGGT
GCGGACATGA ACTTTGCGTG GCCGTCCGCC GAAATTGCCG TGATGGGCGC CAGCGGTGCC
GCCGAGATTA TTTTCAAACG CGAGATCGCC CAGGCGGAAA ACCCCGTGGA GAAATTGCAG
GAAAAAATCG ACGAATACAC GCATAAGTTT GCCAACCCCT ACCGCGCCGC CCACCGGGGC
TATATCGACG AGGTGATCCA CCCCGACCAG ACCCGCGCCA AGCTGATCCG CGCATTTGAA
ATGCTCGAAA ACAAGGTGGA TGTATTGCCC CGGAAGAAGC ACGGCAACAT TCCGTTGTAA
|
|---|
| Protein sequence | MESRSAAASK KELLDQKNAE AELGGGESRI QAQHAKGKLT ARERIAILLD KGSFEEIGRF
VMHRSKDFGL DKEHYLGDGV VTGYGKVNGR LVYVFAQDFT VFGGSLSETH AEKICKIMDL
AMKNGAPLIG LNDSGGARIQ EGVLSLAGYA DIFYKNTLAS GVIPQISAVM GPCAGGAVYS
PAITDFILMV ENTSYMFVTG PNVVKTVTHE EVTAEELGGA MTHATKSGVT HFVSANEVEC
LQAIKKLLSY MPQNCEDEAP RQPYTPGDEL RPTLNTLIPE SANQPYDMRE VITELSDPDS
FFEVHENFAE NIVVGFSRIA GRSIGIVANQ PAVLAGVLDI HASQKAARFV RFCDSFNIPL
LVLEDVPGFL PGTDQEWNAI ITNGAKLLYA FCEATVPRIT VITRKAYGGA YDVMNSKHIG
ADMNFAWPSA EIAVMGASGA AEIIFKREIA QAENPVEKLQ EKIDEYTHKF ANPYRAAHRG
YIDEVIHPDQ TRAKLIRAFE MLENKVDVLP RKKHGNIPL
|
|---|
| |