Gene Dfer_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2971 
Symbol 
ID8226544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3634556 
End bp3636058 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content53% 
IMG OID644930801 
ProductABC transporter related 
Protein accessionYP_003087351 
Protein GI255036730 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCA TTTCGCTACA AAACGTTTCT GTCCGCAAAT ACGAATCCAC CGTCCTTTCC 
GAGATTAACT GGAATATAGA AGAAGGAGAA AACTGGGCGA TCGTTGGCCC GAACGGCGCC
GGTAAGTCGG TGCTGCTGGA CGTACTTGCG GGCAGATGGC CTGTTTTGAA TGGCAAAATC
AGCTACGCAT GGACGTCGCC GCTGCGTGAA ACGATCGAAC TCGCTTCGAA CGACTATTCC
TTTAATCGCA TTGTGAGTGC CGGCGCCGAA TATTACCAGC AGCGGTTCCA CGCCTACGAG
TCCGAGCGTG CACCTTCCGT GCGCGCGATC CTCACCGACC AGCTGAAACC GGTCGGCACC
GTGGACGATA AATCCGTGAC GCTGGCCCCT TCAAAAGTGA CCGACGACGA GTTAGCGCGG
GTAAGCGGAC TGCTGTCCAT TACCCATCTG CTCGACCACC CATTTGTGAC CCTTTCCAAC
GGCGAAACGC GACGGATGCT TTTGGCAAAA TCCCTGTTGA AAGAACCGAA GGTGCTGATG
CTCGACAATG CATTCAGCGG CCTGGATGTG CATTCGCGGG AAGTACTTCG AAGTGCCTTG
ACGGAACTGA CTATTCAAGG CGTCACCATC ATCATGGCCA CCACAGCCAC CGAAATACCC
CCTTGCATTA CCCATGTGCT CGAACTCGAA GCAGGGCATA TCCGCGCAAA ACAGGCCGTA
GGAACATTCC AATCGGGAGC AGGCCACGCG CCGCATTTCC CCCAGCCCGA CCCGCAAAAG
CTCGCGCATT TTGGACATCC TGAATTTACG GACTTCACAA ACGCGCTCGA TCTCCGGAAT
ATCCGCGTCA AATACGGCGA AGATCAGATC CTGGACAGCG TGAACTGGAA AATAGCGAAG
GGTGAAAAAT GGGCGCTATC CGGCCCGAAC GGCTCGGGCA AATCCACATT GCTCAGCATT
ATCACTGCCG ATAACCCGCA GCGCTTTGCG AATGACTATG ATTTGTTCGA TCAGAAACGC
GGCGGCGCGG GCGCATCGAT CTGGGATATC AAGCAGAAAA TCGGACACGT TTCGCCGGAG
CTGCATTTGT ATTTCCCTAG AAACACAACT GTTTTCAAGA CGATCGCATC CGGCTTTTTC
GATGCTACGG GCGTTTTCTT CAAAAAACTC ACCGAAACGC AGATCGAACG GGTACATGAG
GTTGCCGAAC TCCTGCACGT GCATGAACTG ATCGAAAAGG ACTTCTCCCA ACTATCCAAA
GGACAGCAAA GAATGGTGCT GCTTGCCCGT GCATTGGTCA AAAACCCGCC GCTGCTCATC
CTCGACGAGC CTTGCCAGGG GTTGGACGCA GATGCGATTG ATTATTTCAA ATCGGTAGTC
AATGCAATCT GCGATACCGA CCAGCGCACG CTGATCTACG TTTCGCATTA CCCGCATGAA
ATTCCCAGCT GCGTGACGCA TTATTTGAAA CTGGAAAAAG GAAAAGTGCT CGAATCGCTC
TGA
 
Protein sequence
MTLISLQNVS VRKYESTVLS EINWNIEEGE NWAIVGPNGA GKSVLLDVLA GRWPVLNGKI 
SYAWTSPLRE TIELASNDYS FNRIVSAGAE YYQQRFHAYE SERAPSVRAI LTDQLKPVGT
VDDKSVTLAP SKVTDDELAR VSGLLSITHL LDHPFVTLSN GETRRMLLAK SLLKEPKVLM
LDNAFSGLDV HSREVLRSAL TELTIQGVTI IMATTATEIP PCITHVLELE AGHIRAKQAV
GTFQSGAGHA PHFPQPDPQK LAHFGHPEFT DFTNALDLRN IRVKYGEDQI LDSVNWKIAK
GEKWALSGPN GSGKSTLLSI ITADNPQRFA NDYDLFDQKR GGAGASIWDI KQKIGHVSPE
LHLYFPRNTT VFKTIASGFF DATGVFFKKL TETQIERVHE VAELLHVHEL IEKDFSQLSK
GQQRMVLLAR ALVKNPPLLI LDEPCQGLDA DAIDYFKSVV NAICDTDQRT LIYVSHYPHE
IPSCVTHYLK LEKGKVLESL