Gene Dfer_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2970 
Symbol 
ID8226543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3633901 
End bp3634440 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content54% 
IMG OID644930800 
Productintracellular protease, PfpI family 
Protein accessionYP_003087350 
Protein GI255036729 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGA TCAAAGTCGC TATACTGGTT GCCGATGGAT TTGAGCAGGT CGAAATGACA 
TGCCCCAGAA AAGTCCTAAA CCAACACGGA GCGACTACTC ACGTTATCTC GCCCAACAAA
GACATCGTAA AAGGGTGGAG CCATCTCGAT TGGGGCGAAA ACCACAAAGT GGATGTGCCG
CTCGACATGG CCCGCGCCGA ATACTACGAC GCGCTGCTGC TTCCTGGCGG TGTAATGGGC
CTGGACGCCT TGCGGATCAA CCACAAAGCG GTCGATTTCG TGCGCGCATT CTTCTTTGCA
GGCAAGCCCG TAGCGGCAAT TTGCCACGGA CCACAAATCC TGATCGACGC CGACGTTGTG
CTGGGCCGCA CCCTCACCTC TTACGCCGCC ATCCGCCACG ACCTCGAAAA CGCTGGCGCC
ATTTGGGTGG ACCAGGAAGT AGTTACCAAC AACGGATTGG TTACAAGCCG CACCACGGAC
GACCTTTCGG CGTTCGTCGA CACGATGATT AAGGAATTCA ATATGGAACT ACATCAGTAG
 
Protein sequence
MNLIKVAILV ADGFEQVEMT CPRKVLNQHG ATTHVISPNK DIVKGWSHLD WGENHKVDVP 
LDMARAEYYD ALLLPGGVMG LDALRINHKA VDFVRAFFFA GKPVAAICHG PQILIDADVV
LGRTLTSYAA IRHDLENAGA IWVDQEVVTN NGLVTSRTTD DLSAFVDTMI KEFNMELHQ