Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2970 |
Symbol | |
ID | 8226543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3633901 |
End bp | 3634440 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930800 |
Product | intracellular protease, PfpI family |
Protein accession | YP_003087350 |
Protein GI | 255036729 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTGA TCAAAGTCGC TATACTGGTT GCCGATGGAT TTGAGCAGGT CGAAATGACA TGCCCCAGAA AAGTCCTAAA CCAACACGGA GCGACTACTC ACGTTATCTC GCCCAACAAA GACATCGTAA AAGGGTGGAG CCATCTCGAT TGGGGCGAAA ACCACAAAGT GGATGTGCCG CTCGACATGG CCCGCGCCGA ATACTACGAC GCGCTGCTGC TTCCTGGCGG TGTAATGGGC CTGGACGCCT TGCGGATCAA CCACAAAGCG GTCGATTTCG TGCGCGCATT CTTCTTTGCA GGCAAGCCCG TAGCGGCAAT TTGCCACGGA CCACAAATCC TGATCGACGC CGACGTTGTG CTGGGCCGCA CCCTCACCTC TTACGCCGCC ATCCGCCACG ACCTCGAAAA CGCTGGCGCC ATTTGGGTGG ACCAGGAAGT AGTTACCAAC AACGGATTGG TTACAAGCCG CACCACGGAC GACCTTTCGG CGTTCGTCGA CACGATGATT AAGGAATTCA ATATGGAACT ACATCAGTAG
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Protein sequence | MNLIKVAILV ADGFEQVEMT CPRKVLNQHG ATTHVISPNK DIVKGWSHLD WGENHKVDVP LDMARAEYYD ALLLPGGVMG LDALRINHKA VDFVRAFFFA GKPVAAICHG PQILIDADVV LGRTLTSYAA IRHDLENAGA IWVDQEVVTN NGLVTSRTTD DLSAFVDTMI KEFNMELHQ
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