Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2948 |
Symbol | |
ID | 8226521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3610768 |
End bp | 3611271 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930778 |
Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_003087328 |
Protein GI | 255036707 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCCAT TCCGCGTAGG CCAGGGCTAC GATGTTCATC AGTTGGTAGA AGGCCGGCCT TTCTGGCTCG GCGGTATTTT GATCCCCCAC ACACACGGTG CCAAAGGCCA TTCCGACGCC GATGTGGTGT GCCACGTAAT GTGCGACGCG CTGCTCGGCG CAGCCAATCT CCGCAATATC GGCTACCATT TTTCCGACAA AGACCCGCAA TGGAAGGGCG TCGACAGCAA AATTCTGCTG GCCAAAGTAT TGGAAATGAT CCGCGAAAAA GGCTACGAAG TCGGAAACGT GGATGTGACC ATCGTACTCC AAAATCCAAA ACTGAACCCG CACATTCCTG CCATGAAAAC CTGCCTGGCA GAGGTGACGG GCATATCCGA AGAAGACATT TCGATCAAAG CTACCACTTC CGAGCATTTG GGATTTGTGG GACGGGAGGA AGGCATTGCG GCGCATTGCG TAGCGTTGAT CTATCAACCC GGCACGTTCC CGGGAATTGC CTGA
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Protein sequence | MFPFRVGQGY DVHQLVEGRP FWLGGILIPH THGAKGHSDA DVVCHVMCDA LLGAANLRNI GYHFSDKDPQ WKGVDSKILL AKVLEMIREK GYEVGNVDVT IVLQNPKLNP HIPAMKTCLA EVTGISEEDI SIKATTSEHL GFVGREEGIA AHCVALIYQP GTFPGIA
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