Gene Dfer_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2942 
Symbol 
ID8226515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3606068 
End bp3607723 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content57% 
IMG OID644930772 
Producthypothetical protein 
Protein accessionYP_003087322 
Protein GI255036701 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.099275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT ATATCTCCCT CATTCTATTC GCGCTGCTCA GTATCGCTTC GCATGCGCAC 
GTAGGCAGCG CGGGCGTGCA AATGCAGGCG CAGGCGGGTG CCTACAAGGT GCTCGTAAGC
ATTACACCGC CCGACGTGAT TCCCGGAACG GCACAGGTAT CCGTTTTTAT TGAAAACGGC
GAGGCCCGCA AAGTGACGGT GCGGCCTATT TACTTCTACT CCGGCGATAA AGGAGCGCCT
TCCGCAGACC CGCTTTCACC CGTTGCAGGC CAGAAAGGAC AATTCCAGGG AGCCGTTTGG
CTTATGGAAC CGGGTTCGTC CAGTGCGCAG ATCAACATTG AGGGAATCCA GGGCGATGCC
GAGCTGATCA TTCCTATCGT AGCCGTTTCC ACCGCGGAGC GCGATATGCC GAAGGGCCTC
GGCATCGGTT TGAGCATTCT GGGACTGTTA TTGTTTTTGC TCATGATCAC GACCATCGGC
GCCAGTGTAA GCGATGGCTT GCTGAAACCC GGCCAGGTCC TTACCGGCGC GCAGAAACGG
AAGCGGTGGA TCAATATGGG CATCGCCACG GTGGTATGCT CGCTCATTTT ATATGGCGGA
AGCAGCTGGT GGGATAGCTG GGCAGCCGAA TACAAACAAT GGTTGTACAA GCCTTTGAAA
GCTAAAACCG CGGTGATGGA AGCGGATTCC CAGCGGGCTT TTCAGCTAAA AATCGATACT
ACCGGCTGGG ACCGGCGCAT GAAGGGAAGT ATGCTGAGCA CACTCGTTCC CGACCACGGG
AAGATCATGC ACACGTTTCT CGTGCGCACG CCGGGGCTCG ATGCATTTGC CCACGTGCAC
CCCGATCGCA AAGATAGCCT CACGTTCCAG GCAGCGCTGC CCGATTTGCC GGCGGGGAAA
TACTTGGTTT ATTCAGACAT CGTCCAATAT TCTGGCTTTG CCGAAACGAT CGTAGATACA
CTGGTTATCC CGGCCCCGAA AACTGCCGCT CAAACAGCCC GGGCGGCATC GGAGGACGAC
AACTACATCA TCACCGACCC GCTCGATACC CCCGGCAGGG TGCCCATGGG CGAAAACGTC
GTGATTTGCG GGAAGCCTGG CACCAAAACC GTTTTCAAGG ACGGGTCCTA CGCCATTTGG
GAAGGCAAGC CCGACAAGCC GCTCGATGCC GGAAAGCCTT ATCAGCTTAA CTTCGAAATT
TTCAATCCCG ATAACAGCCC CTGCTTTCCC GAGCCTTACC TGGGAATGCT CGGCCACGCG
GTGGTCATGC GGTCGGATGG CTCGGTGTAC ATTCACCTCC ACCCGAGCGG CTCCTATTCG
ATGGCGGCAG AGCAATCGTT CGAAAACCGC ATTTCGGACA CGGCCCATGT GGCCAGGCGG
CCCAAACCGG ACGTGTTCCG CGACAGCATC GACCGGCACC TGGCCCGGCT GAACACCATG
CCCACGGTGG ACCGCGAGCT GTTTCTCATG GGGGAAATGG GCATGTATAA TGCTGAGGAA
GGCGGCATGA CGGGCATGGA GCACGGCACA CGCATTTCTT TTCCGTATGC ATTCCCGAAA
GCCGGACAGT ATCGGATATT CCTTCAAATC AAAAGAAACG ACAAAGTCCT GACCGGCGCC
TTCGATGTGA AGGTCACCGA TCCGGTTGCA TTATAG
 
Protein sequence
MKKYISLILF ALLSIASHAH VGSAGVQMQA QAGAYKVLVS ITPPDVIPGT AQVSVFIENG 
EARKVTVRPI YFYSGDKGAP SADPLSPVAG QKGQFQGAVW LMEPGSSSAQ INIEGIQGDA
ELIIPIVAVS TAERDMPKGL GIGLSILGLL LFLLMITTIG ASVSDGLLKP GQVLTGAQKR
KRWINMGIAT VVCSLILYGG SSWWDSWAAE YKQWLYKPLK AKTAVMEADS QRAFQLKIDT
TGWDRRMKGS MLSTLVPDHG KIMHTFLVRT PGLDAFAHVH PDRKDSLTFQ AALPDLPAGK
YLVYSDIVQY SGFAETIVDT LVIPAPKTAA QTARAASEDD NYIITDPLDT PGRVPMGENV
VICGKPGTKT VFKDGSYAIW EGKPDKPLDA GKPYQLNFEI FNPDNSPCFP EPYLGMLGHA
VVMRSDGSVY IHLHPSGSYS MAAEQSFENR ISDTAHVARR PKPDVFRDSI DRHLARLNTM
PTVDRELFLM GEMGMYNAEE GGMTGMEHGT RISFPYAFPK AGQYRIFLQI KRNDKVLTGA
FDVKVTDPVA L