Gene Dfer_2924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2924 
Symbol 
ID8226497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3589384 
End bp3591246 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content53% 
IMG OID644930754 
Producthypothetical protein 
Protein accessionYP_003087304 
Protein GI255036683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCA ACCGCAGCAG TAGACAATTC TTCACACACG GGATTTTTAT ATGGATTTGC 
GTGCTGGCGA TGGTGCAGAG TCATGTCGCC CGGGCGCAAT TGCGCATCGT GCCGATTGAT
CAGGCCCGGT ATCATGTATC GGAGAGCGAG TCCGAACCGC AAAACCACCG GACCCAGGCC
TCGTTGAACC TGCCTTTTTT TGACGATTTT TCTACTACCA AAACACTCGC GCCCAGCACC
CGCTACTGGC TGCCCGGAAG CGGTGTTTAT ATTAATAATA CCCTTGTGAA TGCCCATCCG
TCGGTGAATG TTGCGACGTT CGACGGGCTG GACGCCAATG GCGCTCCTTA CAACGTGGTA
AACCCGCTTT CACAGGGCTA TACGGACACG CTCACTTCCC AACCGGTGAA TCTGGGCGGA
AAAGTGGCTG CCGATTCGGT GTACCTGAGT TTCTATTGGG CGGCCAAAGG GCTTGGCGAA
CTGCCCGATT CCAGTGACTT TCTCAGATTA GAGTTTTTTA ACAAAGCCGC TGAGTGGGTG
CCGGTTTGGA CACAGCTGGG TTATCAGGTG GACACTTTGT TCCATCAGCA GTTTATTGCC
ATTAAAGACG CCAATTACCT GCACGAAGCA TTTCAGTTCC GGTTCCGGTC CTACGGGCGG
AGCACAGGCG CATACGACAC CTGGCATCTG GATTATGTCT ATTTGAATGC GAAGAGGTCT
GTAAAGCAGC CCTATCTGTT TGACGTGGCG TTACGGAAAC CGGTTTCAAA CCTGCTTAAA
AAATACACGG CGATGCCTTT GCGGCAATAT CGCGTGAGCC CCGCAGCCGC GATGGCCGAT
TCCCTGAGGA CAGATATTGT CAATCATTTC AACAACTTCA ACGTCCTTAC GAGCACATTT
ACGCTCACGG ACGCGCAGTG GGGAACCGAA ATATTGCGTA ATGTCCAGCG CTCGGTGTTT
GTGGAAGCGC TTAAATCACA AACACTGCGC GTAAAAGTTT CGCCGGTTAA TGCAGCCGCG
CAGCTCGACA GCCTGCATTT GATCAGTAAA TTTTACATTG CCACCACGGA CACCATCCCC
GGCGCCAATC TCAAAACGAA CGACACTATT ACGGCCCGGA CCGCATTGAG CGATTACTTC
GCTTATGACG ATGGCAGCGC CGAATATGGC GTGCAGGTGA ACCAGAAACT GGGCCGCGTG
GCGGTGCAAT ATGCCCTCGC AAAACCGGAT ACGATCGGCG GTGTGCGGAT GTCGATGGTG
TCTTTTAACA AAGATATTTC CGGCCAGGGG TTCACAATCC AGATTTACAG CAACAAAGGC
GGCAGGCCCG ACCAGGTTAT CGCGCAGCGC TCGGTGGCGG TCCGGTACCC GGTCATGCGC
GATGGATTTA TTGAATATGC ATTTGCCAAT CCGGTGGCTG TGCCCGATAC ATTTTATGTA
GGTTGGGTGC AGATCAACGA TCAGCCGGTA ACCGTGGGCT TCGACCGCAA TTCGCTGCTG
GGCCGCAATG CGGTTTTTTA CAACCTTGGC ACCGAGTGGG CAAAAGAAAC TTCTCTGAAA
GGCTCGATCA TGATCCGGCC GTACCTCGGG AAGAGCGTGC AGGGCGTGAT CACCGGGAAT
GAGCCGCAGG AGGCGATCAA TGCCGTTTTT TATCCCAATC CGGCGAGAGG AGCGGTGCAT
TGGAAAAACT CTTCCCTTCG TAAAGTAGAA ATCTACAACT CCGCCGGTAG CCTCATCCAT
GCATTTGAAC CGGCCCCCGA CCAGCATTCT ACCGGCGTGG AGCGATTGGA CCAGGGCATT
TATATTTTCA AGGCCACGGA CGGGAGACGA TCCTTTGTGC AAAAAATGTT AATTTCGAAA
TAG
 
Protein sequence
MRINRSSRQF FTHGIFIWIC VLAMVQSHVA RAQLRIVPID QARYHVSESE SEPQNHRTQA 
SLNLPFFDDF STTKTLAPST RYWLPGSGVY INNTLVNAHP SVNVATFDGL DANGAPYNVV
NPLSQGYTDT LTSQPVNLGG KVAADSVYLS FYWAAKGLGE LPDSSDFLRL EFFNKAAEWV
PVWTQLGYQV DTLFHQQFIA IKDANYLHEA FQFRFRSYGR STGAYDTWHL DYVYLNAKRS
VKQPYLFDVA LRKPVSNLLK KYTAMPLRQY RVSPAAAMAD SLRTDIVNHF NNFNVLTSTF
TLTDAQWGTE ILRNVQRSVF VEALKSQTLR VKVSPVNAAA QLDSLHLISK FYIATTDTIP
GANLKTNDTI TARTALSDYF AYDDGSAEYG VQVNQKLGRV AVQYALAKPD TIGGVRMSMV
SFNKDISGQG FTIQIYSNKG GRPDQVIAQR SVAVRYPVMR DGFIEYAFAN PVAVPDTFYV
GWVQINDQPV TVGFDRNSLL GRNAVFYNLG TEWAKETSLK GSIMIRPYLG KSVQGVITGN
EPQEAINAVF YPNPARGAVH WKNSSLRKVE IYNSAGSLIH AFEPAPDQHS TGVERLDQGI
YIFKATDGRR SFVQKMLISK