Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2924 |
Symbol | |
ID | 8226497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3589384 |
End bp | 3591246 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644930754 |
Product | hypothetical protein |
Protein accession | YP_003087304 |
Protein GI | 255036683 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAATCA ACCGCAGCAG TAGACAATTC TTCACACACG GGATTTTTAT ATGGATTTGC GTGCTGGCGA TGGTGCAGAG TCATGTCGCC CGGGCGCAAT TGCGCATCGT GCCGATTGAT CAGGCCCGGT ATCATGTATC GGAGAGCGAG TCCGAACCGC AAAACCACCG GACCCAGGCC TCGTTGAACC TGCCTTTTTT TGACGATTTT TCTACTACCA AAACACTCGC GCCCAGCACC CGCTACTGGC TGCCCGGAAG CGGTGTTTAT ATTAATAATA CCCTTGTGAA TGCCCATCCG TCGGTGAATG TTGCGACGTT CGACGGGCTG GACGCCAATG GCGCTCCTTA CAACGTGGTA AACCCGCTTT CACAGGGCTA TACGGACACG CTCACTTCCC AACCGGTGAA TCTGGGCGGA AAAGTGGCTG CCGATTCGGT GTACCTGAGT TTCTATTGGG CGGCCAAAGG GCTTGGCGAA CTGCCCGATT CCAGTGACTT TCTCAGATTA GAGTTTTTTA ACAAAGCCGC TGAGTGGGTG CCGGTTTGGA CACAGCTGGG TTATCAGGTG GACACTTTGT TCCATCAGCA GTTTATTGCC ATTAAAGACG CCAATTACCT GCACGAAGCA TTTCAGTTCC GGTTCCGGTC CTACGGGCGG AGCACAGGCG CATACGACAC CTGGCATCTG GATTATGTCT ATTTGAATGC GAAGAGGTCT GTAAAGCAGC CCTATCTGTT TGACGTGGCG TTACGGAAAC CGGTTTCAAA CCTGCTTAAA AAATACACGG CGATGCCTTT GCGGCAATAT CGCGTGAGCC CCGCAGCCGC GATGGCCGAT TCCCTGAGGA CAGATATTGT CAATCATTTC AACAACTTCA ACGTCCTTAC GAGCACATTT ACGCTCACGG ACGCGCAGTG GGGAACCGAA ATATTGCGTA ATGTCCAGCG CTCGGTGTTT GTGGAAGCGC TTAAATCACA AACACTGCGC GTAAAAGTTT CGCCGGTTAA TGCAGCCGCG CAGCTCGACA GCCTGCATTT GATCAGTAAA TTTTACATTG CCACCACGGA CACCATCCCC GGCGCCAATC TCAAAACGAA CGACACTATT ACGGCCCGGA CCGCATTGAG CGATTACTTC GCTTATGACG ATGGCAGCGC CGAATATGGC GTGCAGGTGA ACCAGAAACT GGGCCGCGTG GCGGTGCAAT ATGCCCTCGC AAAACCGGAT ACGATCGGCG GTGTGCGGAT GTCGATGGTG TCTTTTAACA AAGATATTTC CGGCCAGGGG TTCACAATCC AGATTTACAG CAACAAAGGC GGCAGGCCCG ACCAGGTTAT CGCGCAGCGC TCGGTGGCGG TCCGGTACCC GGTCATGCGC GATGGATTTA TTGAATATGC ATTTGCCAAT CCGGTGGCTG TGCCCGATAC ATTTTATGTA GGTTGGGTGC AGATCAACGA TCAGCCGGTA ACCGTGGGCT TCGACCGCAA TTCGCTGCTG GGCCGCAATG CGGTTTTTTA CAACCTTGGC ACCGAGTGGG CAAAAGAAAC TTCTCTGAAA GGCTCGATCA TGATCCGGCC GTACCTCGGG AAGAGCGTGC AGGGCGTGAT CACCGGGAAT GAGCCGCAGG AGGCGATCAA TGCCGTTTTT TATCCCAATC CGGCGAGAGG AGCGGTGCAT TGGAAAAACT CTTCCCTTCG TAAAGTAGAA ATCTACAACT CCGCCGGTAG CCTCATCCAT GCATTTGAAC CGGCCCCCGA CCAGCATTCT ACCGGCGTGG AGCGATTGGA CCAGGGCATT TATATTTTCA AGGCCACGGA CGGGAGACGA TCCTTTGTGC AAAAAATGTT AATTTCGAAA TAG
|
Protein sequence | MRINRSSRQF FTHGIFIWIC VLAMVQSHVA RAQLRIVPID QARYHVSESE SEPQNHRTQA SLNLPFFDDF STTKTLAPST RYWLPGSGVY INNTLVNAHP SVNVATFDGL DANGAPYNVV NPLSQGYTDT LTSQPVNLGG KVAADSVYLS FYWAAKGLGE LPDSSDFLRL EFFNKAAEWV PVWTQLGYQV DTLFHQQFIA IKDANYLHEA FQFRFRSYGR STGAYDTWHL DYVYLNAKRS VKQPYLFDVA LRKPVSNLLK KYTAMPLRQY RVSPAAAMAD SLRTDIVNHF NNFNVLTSTF TLTDAQWGTE ILRNVQRSVF VEALKSQTLR VKVSPVNAAA QLDSLHLISK FYIATTDTIP GANLKTNDTI TARTALSDYF AYDDGSAEYG VQVNQKLGRV AVQYALAKPD TIGGVRMSMV SFNKDISGQG FTIQIYSNKG GRPDQVIAQR SVAVRYPVMR DGFIEYAFAN PVAVPDTFYV GWVQINDQPV TVGFDRNSLL GRNAVFYNLG TEWAKETSLK GSIMIRPYLG KSVQGVITGN EPQEAINAVF YPNPARGAVH WKNSSLRKVE IYNSAGSLIH AFEPAPDQHS TGVERLDQGI YIFKATDGRR SFVQKMLISK
|
| |