Gene Dfer_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2918 
Symbol 
ID8226491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3583938 
End bp3585005 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content47% 
IMG OID644930748 
Producthypothetical protein 
Protein accessionYP_003087298 
Protein GI255036677 
COG category 
COG ID 
TIGRFAM ID[TIGR03523] gliding motility associated protien GldN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000360393 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGATA TGAGAAGAAT GAACGGAAAA ACGATTGCAT GGTCTTTGCT GTCGCTGTCT 
CTTGCAAGTA CTGCCACATT TGCGCAGGAA AAAGAGGATT CGACTGCGAA TCAGTTCTCA
TCACGCCCCA TCTCCGACGG TGACGTGATG ATGAAAAGAA CGCTCTGGAG ACGGGTCGAT
TTGAAAGAAA AGCAGAACAT TTCCATGTTC TCTAAAAACA ATGAGATCAC ACGCTACTTG
TTGGATGCGG CGAAAGCAGG ACTGATCGAC GCCTATGTAA ACGATTCCTG CGCAACCAAA
ATCACTGGTG AAGAACTTCA TAAACGCATC CTGATCCCTA ACCAAACCGC GGGACTCTCT
GCCGAGGAAA TAGCGGCGGG TTTCGGAGAA CCGGCGAAAG CGGACGGCTG GGATGCGAAA
GCCAAAACTG ATCCGAGCAA GCAGGCTGCT AATGCAGATG ACGGATGGGG CAACACGGCT
AAAAAGGATA CCAAGAAAGA AGAAGTGGTA GAAGATGACG GATGGGGACC TCCCAAAAAG
AAATCTTCGA AAAAAGGTGC TAAAACCGAG GTTGCCAAAG AAGAACCAAA AGTGGAAGAG
CCTAAGCCGG ACAGCACTTC TTTCGAAACA CAACAATTTG CAGCAACGGA AGAAGAATAT
TTCCCCGAAC AGCTGAGCAT TCTCGAAGTG AAGGAAGACT GGGTTTTCGA CAAGAAACGT
TCACGTTTGT ACAACGATAT CCAAACGCTG ACGATCGTTC TTCCCGCAGA GCAAACTGCA
ACAGGTCTGG AACTTCCGGT GGCCTCATTC CGCTGGAAAG ACGTTGAAAG ACTTTTCAGA
AGCGATCCTA AAAAATACAT CTGGTATAAC ACCCATAATA CCGCCCAAAA CAAGAACCTG
GCCGATGCAT TTGACCTTCG CCTGTTCTAC GGACGGATCA CCAAGTTCTC CAATGCCAAC
GATAAGGCAT TCCTAGACAT TTACAACGGT GAAAAAGAGG CCCTTATCAA ATCCCTGAAC
TACGAACAGG AGCTGATGGA ACTGGAACAC GGTCTCTGGG AATACTAA
 
Protein sequence
MYDMRRMNGK TIAWSLLSLS LASTATFAQE KEDSTANQFS SRPISDGDVM MKRTLWRRVD 
LKEKQNISMF SKNNEITRYL LDAAKAGLID AYVNDSCATK ITGEELHKRI LIPNQTAGLS
AEEIAAGFGE PAKADGWDAK AKTDPSKQAA NADDGWGNTA KKDTKKEEVV EDDGWGPPKK
KSSKKGAKTE VAKEEPKVEE PKPDSTSFET QQFAATEEEY FPEQLSILEV KEDWVFDKKR
SRLYNDIQTL TIVLPAEQTA TGLELPVASF RWKDVERLFR SDPKKYIWYN THNTAQNKNL
ADAFDLRLFY GRITKFSNAN DKAFLDIYNG EKEALIKSLN YEQELMELEH GLWEY