Gene Dfer_2915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2915 
Symbol 
ID8226488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3580194 
End bp3581264 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content51% 
IMG OID644930745 
Productprotein of unknown function DUF323 
Protein accessionYP_003087295 
Protein GI255036674 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03525] gliding motility-associated lipoprotein GldK
[TIGR03529] gliding motility-associated lipoprotein GldK 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000535404 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTGA AAGTGTTCTA TCGGGATGGA GTCAAAAGCC TGCTTCTGGT AGCCGCAATA 
ATGCTCTTGC AAAGCTGCGG TTTTCTCAAA AGCAAGTTTG GCAAGGGAGG AAAAGAAGAA
AGCGGTATTC AAAACGGTGA AATCACTGCT ACTGCCCGTA AGGGATTTAA GCAGACCACT
CCGGCAGGGA TGGTTGTGAT CCCCTCAGGT TCTTTTGTGA TGGGCCAGGC TGACGAAGAC
ATCGCTTCCT CCATGAACAA CATGAACCGC CGCGTGACGA TCAGCTCATT CTTCATGGAT
GATACTGAGA TCACCAACAA CGAATATCGT CAGTTCGTGA ACGCGCTGCT GGTTGACTCC
GTATCCGTAC TCGGTGAGGA AGAAATCATG GCCAAGTACT ATCCCGATAC TACCGTTTGG
AAAAAAGACT TTGCTTATTC CAATGGCGAT CCATTCGTAG AATACTATTA TCAGCACCCT
GGCTTTGATA CCTACCCTGT GGTGGGCGTG AGCTGGGTAG CCGCTACCTA CTTCTCAAAA
TGGCGCACGA ACCTGCTCCA CGACTTCCAG AACAAAGAAG GTCAGTTCAA CTCAACAGGG
TTCCGTCTGC CGACAGAAGC TGAATGGGAA TGGGCTGCAA GAGGCGGACG TGCCGTTGCG
AAATATCCCT GGGGTAACCC TTACACCATG AATGCAAAGG GCTGCTTCCT GGCGAACTTC
AAACCGCAGC GCGGTAATTA CGATGCCGAT GGCTATCCTT ACACAGGCCC GGCAAACGCC
TACAATCCTA ACGACTTCGG CTTGTACAAC ATGGCCGGAA ACGTAGCAGA ATGGACTTCC
GACGCTTATA CCGATAATGC AACGGCGATC GTGTGGGATA TGAACCCGCA ATACAACGAC
CCGAACGAAC CACGCAAAGT AGTAAAAGGC GGATCGTGGA AAGATATCGC TTACTACCTG
CAAACCGGTA CCCGGACCTA CGAATTCGAA ACAGAAACCC GCGCATTCAT CGGCTTCCGT
TGCGTGATGG ATAACGTCAA CGACCGCGGA GGAGCTCGTG CCCGTCGTTA A
 
Protein sequence
MNVKVFYRDG VKSLLLVAAI MLLQSCGFLK SKFGKGGKEE SGIQNGEITA TARKGFKQTT 
PAGMVVIPSG SFVMGQADED IASSMNNMNR RVTISSFFMD DTEITNNEYR QFVNALLVDS
VSVLGEEEIM AKYYPDTTVW KKDFAYSNGD PFVEYYYQHP GFDTYPVVGV SWVAATYFSK
WRTNLLHDFQ NKEGQFNSTG FRLPTEAEWE WAARGGRAVA KYPWGNPYTM NAKGCFLANF
KPQRGNYDAD GYPYTGPANA YNPNDFGLYN MAGNVAEWTS DAYTDNATAI VWDMNPQYND
PNEPRKVVKG GSWKDIAYYL QTGTRTYEFE TETRAFIGFR CVMDNVNDRG GARARR