| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2907 |
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| Symbol | |
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| ID | 8226480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3572412 |
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| End bp | 3573827 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644930737 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003087287 |
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| Protein GI | 255036666 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACTC GGAATTTGAA TACTTTTATA CACTATTTAA AAAACATTGA TTTGAGGAAA
AGGTTTACTT TCATGAGACT TCAATTTACT GGCATTTCAT TTCTCCTTGC ACTTGCTTTC
TATTGCCCCG CCTTTGCACA ACGTTCTGCA GCCGAGTATT TCGAAGACGG TAATACCAAA
GCCGGTACAG GCGATTTCAA TGGGGCCATG CAGGCATATA CCACGGTGAT TTCCATGAAT
CCCGACCACG CGCCCAGCTA TTTCAACCGC GGGCTTGCCA AGGCCAATCT CAAAGATTAC
CGCGGCGCGA TGGGCGATTA CGACAGGGCC ATCGAGCTGA ATCCGAAAGA AGCGCTTTAT
TATCAAAGCC GTGGTGTGAG CAAAAGTTTG CAGGACGATT ACCGTTCGGC CATTGACGAT
TATTCCAAGG CCATCGAGCT GAACCCGGAA GAGCCCAAAG CCTATTATAA CCGCGGCGTG
AGCTATGCTA AACTGAAAAA TCACCGCAAT GCGCTCGTGG ACCTCGACCA TGCATTGTCG
CTGAACCCCG ACGAGCTGGC GGCATTGTAT GCAAGAGGCA ATTGCAAACA GGATTTGCAG
GAATATGCCG GCAGCCTCGC CGATTTTACC AGGGTAATTG AGCTAAGTCC CAAACGCACA
GGTGCCTATG CCGGCAGAGG CCTCGCAAAG CTGGAACTGG GCGATTACCA GGGTGCCGCC
GCCGATTTCA CCCGCGCCAT CGAACTCAGT CCCAACGACA GCGAATACTA CAATAACAGG
GGCCTGGCCA AAACCAAACT GGAAGATTTC CAGGGCGCGA TCCTCGATTA CGACAAAACC
ATCCAGCTCG ACGCCGAAAA CTATAATGCC TACTACGGCC GCGGCTTCGC AAAAGGAAAG
CTCAACGACC CGCGCGGTGC CATCGCCGAC CTGTCGAAAG CCATTGAAGT GAAAAATGCC
TATACCGGCG ACCCAAAAAA GAACGCTTAC ATTGGCAAGA TCAACAAAGA GAAACTCGAC
GAGCTGCGCG ACCAGGTGCA GACGAACATT AAAATCGACA AACTCACGAA CGAGCGCGCG
GAAGCGTATT ATGCACGCGC AATCGCGAAG TCGAAAGTAG GGGAATTAAA AGGTGCGCTG
GCCGACCTTA CCATCGCCGT GGAGCTCAGT CCAACCTATT CCAATGCCTA CTTCTCCCGC
GCCATGATCC GTTCGGCAGC GGGGGACCAA ATGGGCGCCG TGCTGGACTT CACCAGCTCC
ATCAAACTCC GCTCCGATTA TCCCGAAGCT TATTATTTGA GGGGGATCGT GAAAAATAGC
CTGGGAGAAA TCAACGACGG CTGCCTTGAT TTGAGCAAAG CCGGAGAGCT GGGATATCAG
CAAGCCTACA AAGTGATCGG TGCGTATTGT AATTAA
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| Protein sequence | MLTRNLNTFI HYLKNIDLRK RFTFMRLQFT GISFLLALAF YCPAFAQRSA AEYFEDGNTK
AGTGDFNGAM QAYTTVISMN PDHAPSYFNR GLAKANLKDY RGAMGDYDRA IELNPKEALY
YQSRGVSKSL QDDYRSAIDD YSKAIELNPE EPKAYYNRGV SYAKLKNHRN ALVDLDHALS
LNPDELAALY ARGNCKQDLQ EYAGSLADFT RVIELSPKRT GAYAGRGLAK LELGDYQGAA
ADFTRAIELS PNDSEYYNNR GLAKTKLEDF QGAILDYDKT IQLDAENYNA YYGRGFAKGK
LNDPRGAIAD LSKAIEVKNA YTGDPKKNAY IGKINKEKLD ELRDQVQTNI KIDKLTNERA
EAYYARAIAK SKVGELKGAL ADLTIAVELS PTYSNAYFSR AMIRSAAGDQ MGAVLDFTSS
IKLRSDYPEA YYLRGIVKNS LGEINDGCLD LSKAGELGYQ QAYKVIGAYC N
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