Gene Dfer_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2903 
Symbol 
ID8226476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3569067 
End bp3570533 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content50% 
IMG OID644930733 
ProductNa+/solute symporter 
Protein accessionYP_003087283 
Protein GI255036662 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.585746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTT ACATATCCCT TCTGATCCTG GTGGTTTATT TTGGAATGCT AATCACAGTG 
TCCATTTATA CGGCCAGGGG AGCGGATACC AACACATTTT TCACCGCCAA CCGGCAATCG
CCGTGGTACC TGGTGGCGTT CGGGATGATA GGCACCTCGC TGTCGGGGGT CACGTTCGTT
TCGGTGCCGG GTGCAGTGGT GAATATCCAG TTTTCGTATT TTCAGGTGGT GATCGGGTAC
ATTCTCGGTT ACCTGGTAAT CGGTACGGTG CTGATGCCGC TTTATTACCG GCTCAACCTC
ATTTCCATCT ATTCCTACCT CGAACAGCGC TTTGGTTTCT GGTCGTACAA AACGGGTTCA
GGGTTTTTCC TGCTTTCGCG CACCATCGGT TCGGCGGTGC GGTTGTACGT CGCCGCGCAG
GTTTTGCAAC TCGCATTGTT CAAGCCGCTG GGCATTCCGT TTGAAGTTGC CGTGGCCATT
ACAATTTTCC TGATCTGGAT TTATACCTTC AAAGGAGGCG TAAAAACGAT CATCGTTACG
GATACCCTGC AAACATTTTT CCTCATTACC GCGGTGGTCC TCACGATCAT ACTCGTTTCC
AAAGAGCTCA ACATCGACGG CCTGGGCGGA ATCTGGACGA CCGTTCAAAA AAGCGACTAT
TCACAAATAT TTTACTGGGA TACGAATGAT CCCAAAAACT TCTTCAAACA GTTTTTTGCG
GGCGTTTTCA TCGCCATTGT CATGACGGGA CTGGATCAGG ACCTGATGCA GAAAAACCTG
ACTTGCAAAA ACATCGGCGA AGCGCAGAAA AACATGTTCT GGTTTGTGGT GGTGCTGGTG
ATCGTGAACT TCCTGTTCCT GTCGCTTGGT GCGCTGCTCT ACGTATATGC AGAGGCGCAA
GGCATCCCTG CGCCGACGAA AACCGACGAT TTTTACCCGA TGCTGGCATT GAACCACCTC
GGGCTGGTAG TGGGCATCAC GTTCCTGCTC GGCATTACCG CCGCAACCTA CGCCAGCTCC
GATTCGGCGC TTACCGCCCT TACGACCGCT TTCTGCATTG ATTTCATGAA TATTGAAAAG
CGTCCGGAAG AAAAACGCGC TTCGATCAAG TTCTGGGTGC ACGTCGGCTT TTCCGTGATC
TTCTACCTGG TAATCCTGAT ATTCAACAGG ATGAATAATA AGGAAGTGAT TACGGCGGTG
TTCGATCTGG CGGGTTATAC TTATGGGCCG CTGCTGGGGC TATTCGCATT CGGCGCATTC
CTGAAAAGGC CTGTCAAGGA CCGGTTCGTT CCCATTGTTT GTATTCTCGC GCCAGTGATT
ACTTACGTGA TCAATGACCA TTCGGCCGAG TGGTTCAATG GGTATAAGTT TGGGTTTGAA
AGGCTCATTA TCAATGGGTT AATTACTTTC ATAGGTCTTT GGCTGCTGCA CGATCGGAAC
GGCCGGCGCT ATGTTGCGCA GGCTTAG
 
Protein sequence
MNPYISLLIL VVYFGMLITV SIYTARGADT NTFFTANRQS PWYLVAFGMI GTSLSGVTFV 
SVPGAVVNIQ FSYFQVVIGY ILGYLVIGTV LMPLYYRLNL ISIYSYLEQR FGFWSYKTGS
GFFLLSRTIG SAVRLYVAAQ VLQLALFKPL GIPFEVAVAI TIFLIWIYTF KGGVKTIIVT
DTLQTFFLIT AVVLTIILVS KELNIDGLGG IWTTVQKSDY SQIFYWDTND PKNFFKQFFA
GVFIAIVMTG LDQDLMQKNL TCKNIGEAQK NMFWFVVVLV IVNFLFLSLG ALLYVYAEAQ
GIPAPTKTDD FYPMLALNHL GLVVGITFLL GITAATYASS DSALTALTTA FCIDFMNIEK
RPEEKRASIK FWVHVGFSVI FYLVILIFNR MNNKEVITAV FDLAGYTYGP LLGLFAFGAF
LKRPVKDRFV PIVCILAPVI TYVINDHSAE WFNGYKFGFE RLIINGLITF IGLWLLHDRN
GRRYVAQA