Gene Dfer_2890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2890 
Symbol 
ID8226463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3556747 
End bp3557781 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content52% 
IMG OID644930720 
ProductDivIVA family protein 
Protein accessionYP_003087270 
Protein GI255036649 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID[TIGR03544] DivIVA domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.104092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAT CCGCTATTGA GATACGCAAG CACACTTTTG AAAAGATTTT CAGAGGTTAT 
GACCCGGACG AAGTAGATGC TTTCCTGAAC TCATTGTCTC AGGAATGGGA GCGGTTTTCA
AGCGAAAACA ACTTGCTTAA GATGCAGCTG GAATACGCGG AGAAGGAATT GGCGAAGTTG
AAAGATATCG AATCAACCTT ATTCAGAACC TTAAAAGCCG CCGAAGATAC CAGCAAGCTG
ATCGAGAAAG AAGCCAACGA AAACGCCGAA AAACGCATTG AGGAATCGCG CGCGGCGGCG
AATGACCTGG TGACAGAAGC GGAACAGCGT ACGAACCAGA TCATTAAGCA AACGGAAGAT
CGTTTGTTGA GATTCAAAGA AGATTTCGCG CAGGAAGTGA AGGTCCAGGA ACGTGATTTC
CGCGCCATCG AAAACTTCCG CGACAATCTT ATTGTGCAGC TGAGCTCGCT CGCCAACAGT
GCGCTGGAAA CAGTGGAGCG CTTTGAGCAG AAATATGATA AAGAGTCGGT CCTCAATAAG
ATGGAGGACA TTAAAAAGCA TATTGCGGAA ATTGAAATTC CGAAAAAGCT GACATTCCAG
CAGCCGGTGG TGATCGAGGT GGAAGAGACG CCCGAGGAAC CGGTAGTGGA CGTGGTGTTG
CAGGACGACA AGCCGGAAAT CGTATTCGAT CTCCCCGAGC AGGCGCCCGA ACCTGAACCG
GTTTTTGAAG TAGATCCCGA ATTGCCGGGC GAGCCTGAGC CGGAAGAAGC ACAGCCTGTG
GCGCCTTTCG CGACGGCCGT TCCAGAGCCA GAGCCGACGC CGGTACCCGA ACCGGAACCA
GCGCAGGAGG AGCCGGTTGC CTACAACCGA CCACGCCAAA CGCCCAAAAG CGCAGCCGAG
GAGGCCGAAG AGGTGCTCGC GGAAATGCAT AAGGTGGCAG AGAAGGCCAG GGATTCTTCG
GGCGGCATTA ACCGGCCGAG AGAAAACAGC CAGCCGAAGA AATCAGGCGG CGGTTCATTT
TTTGACCAAA TCTAA
 
Protein sequence
MKISAIEIRK HTFEKIFRGY DPDEVDAFLN SLSQEWERFS SENNLLKMQL EYAEKELAKL 
KDIESTLFRT LKAAEDTSKL IEKEANENAE KRIEESRAAA NDLVTEAEQR TNQIIKQTED
RLLRFKEDFA QEVKVQERDF RAIENFRDNL IVQLSSLANS ALETVERFEQ KYDKESVLNK
MEDIKKHIAE IEIPKKLTFQ QPVVIEVEET PEEPVVDVVL QDDKPEIVFD LPEQAPEPEP
VFEVDPELPG EPEPEEAQPV APFATAVPEP EPTPVPEPEP AQEEPVAYNR PRQTPKSAAE
EAEEVLAEMH KVAEKARDSS GGINRPRENS QPKKSGGGSF FDQI