| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2885 |
|---|
| Symbol | |
|---|
| ID | 8226458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3551274 |
|---|
| End bp | 3552476 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644930715 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003087265 |
|---|
| Protein GI | 255036644 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0191743 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTACGC CTTACGGACA CCTTACCTAT TGCAGCAACA TCCATCCCGG CGAAAAGTGG
GAGGACCATT TCCGGTCGCT GCGTGAAACG TTACCATTTA TCCGCGAGCA GCTCGCCCCG
GGCAAGCCAT TCGGGCTGGG CCTGCGCGTA GCGAATGAGG CTTCCATCGA GCTCAGTAAG
CCCGAAGTGC TGAACGAGTT TAAGACCTGG CTGGCCGGTC ATGGCATTTA CGTGTTTGTG
ATCAATGGTT TTCCATACGG CGGCTTTCAC AACACGCGCG TAAAGGACGA CGTGCATACG
CCCGACTGGA CGACGCAGGA CCGGCTGGAA TATACGAAGC GCCTCTTCAA CATCCTGACC
GAGCTTCTGC CAGCTGATAT GCACGGAGGT GTTTCCACGC CACCGCTCTC CTACCGACTT
TGGTGGGATT CGGAAGCGGA AAAGCAGGAA GCCACCGAAA AAGCAACCGA TCACATCCTC
GAACTGCTTG ATGAACTGGT CCGCATTGAA AAAGAAACCG GCAAGTTCCT GCATTTGGAC
ATCGAACCCG AACCGGACGG CATTCTCGAC AACACCGAGG ATTTTGTGAC CTGGTATGCG
AATCTGTTGC TTCCGAAAGG CACTATTTAT CTGGTAGAAA AATACGGGAT CTACGGTGAA
GCGGCACAGG CGCTCATCTT GAAACACATT CAGCTGTGCT ACGACATTTG CCACGCGGCG
GTCGGTTTCG AAAAACCGGA AGACATCCTC GATTCGCTGA ATGAATATGG CATTCAGGTC
GGCCGCATAC AGGTGAGCTC AGCTTTGAAG GTAAATTACA ATACTGAAAA GGAAATTAAG
CGCAAGGCAA TCGAAACCTT CGACGAGCCG GTGTACCTCC ACCAGGTAGT GGCCCGCCAC
GACGACGGCC ATTTTACGCA CTACCCCGAT TTAAAAGAAG CACTGACCGA CTGGGACGAA
ACCCATGAGG AATGGCGCGT GCACTTCCAC GTTCCGCTGT TTGTAAACAC TTACGGCGTG
CTGGATTCGA CGCAGGGCGA CATTGTGCAG ACATTGGCAT TGCAAAAAGA AAACCCATTC
TCGGCCTACC TAGAAGTGGA AACCTACACC TGGGGCGTGC TTCCCGAGGA CATGCAAAAG
CCCATCGGCG AATCCATCGT TCGCGAGCTG GAATGGGTGA AGAAAGTTTT GAATTATGAA
TAA
|
|---|
| Protein sequence | MITPYGHLTY CSNIHPGEKW EDHFRSLRET LPFIREQLAP GKPFGLGLRV ANEASIELSK
PEVLNEFKTW LAGHGIYVFV INGFPYGGFH NTRVKDDVHT PDWTTQDRLE YTKRLFNILT
ELLPADMHGG VSTPPLSYRL WWDSEAEKQE ATEKATDHIL ELLDELVRIE KETGKFLHLD
IEPEPDGILD NTEDFVTWYA NLLLPKGTIY LVEKYGIYGE AAQALILKHI QLCYDICHAA
VGFEKPEDIL DSLNEYGIQV GRIQVSSALK VNYNTEKEIK RKAIETFDEP VYLHQVVARH
DDGHFTHYPD LKEALTDWDE THEEWRVHFH VPLFVNTYGV LDSTQGDIVQ TLALQKENPF
SAYLEVETYT WGVLPEDMQK PIGESIVREL EWVKKVLNYE
|
|---|
| |