Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2881 |
Symbol | |
ID | 8226454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3547184 |
End bp | 3548047 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930711 |
Product | hypothetical protein |
Protein accession | YP_003087261 |
Protein GI | 255036640 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00829797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCGATA TTATTAAACA AAAGATCTGG GATATCATCG CTTCCAACAC GTCGGCTGCC GAGGCCGGGT GGTTGCAGCA AAAAGTAGCC CTCGCGCCGG GCGCCGTTGC GCCGATCGAA CTGATGACTG CCTTCGTGGC AGCTTCCCGT TTTTTATCCA AAAAAATCAT TACCACCTCC GAAGCCGAAA AGGCCGCATT GAACCTCGAA ATTCCCGGGT TTTCAGTCGA TGGATGGTCG CTTGTGCGGC TTGGCCGCGT GTGGCTGCTC ACGCAGCTTG ATCCGTCGGA CAAGGAGGAG TATGTTAAAA ACATTGAAAC GCTGTTCGAT ACGGCGGAAA TGAATGAGCT CGTGGCGCTG TATTCGGCAT TGCCGCTGCT TTCCTACCCG GATCAATGGC TCTTCCGGGC GACGGACGCC GTGCGGTCGA ATATGGGATT TGTGTTTGAT GCGATTGCAT TGCATAACCC CTACCCGGAG AAGCATTTCA GCGAGCTTGC CTGGAACCAG CTGGTACTCA AAACGATATT CAACGACAAG CCTATTCATT TGATAGAAGG ACTGGAAAAC CGTACGAATG AAAAGCTGGC CGTGACGCTT TCCGACTTCG CGCACGAGCG CTGGGCGGCC GGTCGCAGCG TGCCTGCACA GGTGTGGCGG CTTACCGGCA AATACCTGAA TTCCGCGTTG CTGGCCGATA TGCAGCATTT GTTTGATTCG GACCAAGAGG ACGACCGTAA GGCGGCCGCA TTGGCCTGCG GCGACGCATC GCTGCCGGCA GCCAATTATT TGTTGGCCAA ATATACCGAT CTGGAAAAAT CAGTAAAATC CGGCGCATTG ACCTGGGCCG ACCTCGAACA TTGA
|
Protein sequence | MSDIIKQKIW DIIASNTSAA EAGWLQQKVA LAPGAVAPIE LMTAFVAASR FLSKKIITTS EAEKAALNLE IPGFSVDGWS LVRLGRVWLL TQLDPSDKEE YVKNIETLFD TAEMNELVAL YSALPLLSYP DQWLFRATDA VRSNMGFVFD AIALHNPYPE KHFSELAWNQ LVLKTIFNDK PIHLIEGLEN RTNEKLAVTL SDFAHERWAA GRSVPAQVWR LTGKYLNSAL LADMQHLFDS DQEDDRKAAA LACGDASLPA ANYLLAKYTD LEKSVKSGAL TWADLEH
|
| |