Gene Dfer_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2875 
Symbol 
ID8226448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3542405 
End bp3543940 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content53% 
IMG OID644930705 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003087255 
Protein GI255036634 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00182464 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00897116 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGTTGA TGAAAAGACT GCTTTTGCTT GCGCTCGTGT GTATGCCGTG GGTGTTGTCA 
GCAAGCCCGA AATATTGGAT TTATCTGAAA AATAAAGACC TGACTGCCAG CCCGGCCGTT
TCGCCGCTGA CGCTGGAAAA CCGGCAGAAA CTGGGGCTCG TCCTTTCAGA TGAAACCGAT
TTGCCGGTCA ATAAAGCCTA CGAAACCGCA TTGCGCGGGC ATTCGGTGAA TATCATCAAC
CGCTCCAAAT GGCTGAATGC AGTTTCCGCC AACCTCACGA GCGAACAGGC CATGAAAGTG
CGCGAACTGG ATTTTGTGGC CGACGTGGTA ATGATCGACC CCGGTTTTTA CATAGCGAAA
ACCCAGCCCA TCGAAAAAGC GCAAATGGCG CCCGTGATGT CGCAGGTGCA GGCTAATGCA
TTCTTAAAGG AAAATATTAC CGCCAAAGAC GTTACGATCG GTGTAATCGA CGCGGGTTTC
TATGGCGCGG ATTCGTCCCT TTCGCTTTCG CAGGTTTTTT CCAATAATAG GGTCCTGGGT
ATCCGTGATT ACGTGAAGCC AGGTCGTCCC GGCGACTTGC TGTTCAGCAC CGCGGAGTCG
TTCTCCGATA TGCACGGCAC TGAAGTGCTT GCCGCCATTG CCGGCATCGA TCACCAGGAC
CAGGTGCAGT ACGGAATGGC CACCAATGCG AAATTCTACC TCGCCCGCAC GGATTATTCC
ATGCGCGAAT ACCGCGGCGA AGAAGATAAC TGGATCGCCG CAATGGAATG GATGGATAGC
CTTGGTGTGC GCCTGATCAA TACTTCATTA GGTTATGCCA AAGGTTTCTC GGACCCGCGA
GAGAATTACC AGCCGGCACA AATGGATGGC AAAACGAGCG CTATCAGCAA AGCCGCGCAG
ATCGCTTCCG ACAAAAAGGG CATTATGATC ATCGTTTCCG CCGGAAATGA AGGCGACGAT
AAGAGCTGGG GCATTGTGTC GGCGCCTGCC GATGCGAAAG GAGTCCTGTC GGTAGGAGCT
ACCAATGGAA AGCTGTGGAA CCGGATCGGT TACAGCAGCA CCGGACCGGA GTTTTTGTCT
TATGTAAAAC CCAATGTTTC CTGCTTTTCG CTTTACGGAA CGTCGCTTTC CGCGCCCGTA
ATCACCGGGT TTGCGGCGTG CCTGCTGCAA GCTAATCCGC AGCTTTCGAA CAAGGAGCTC
ATTTCGCTGA TCGAAAAATC CTCGCATTTG TACCCTTATG GCAATAATTT TGTGGGCTAC
GGCGTGCCGC AGGCCTCCCG CGCACTTGCA CTCGCGAAGG CGCCCTATTT ACCTAACAAC
TCCAAGCTCA TCACGGCCAA AGGACGCAGC TGCGAGGTGG ACGTGACCAG CCAGGACGCT
ATAGTGGCCA TTTACCGCAA AAAGAACGAA AAGGACGTCA TCGCGCAGCA GGTAGCCAAA
GTGCAGAACG GCAAGGTGTC GCTGAAACGC CAGAATAACG AAAGGTTCAC GACCATCGAC
CTTCGTGATT ACGTAGTGGA AGTGGAGTGG AATTGA
 
Protein sequence
MPLMKRLLLL ALVCMPWVLS ASPKYWIYLK NKDLTASPAV SPLTLENRQK LGLVLSDETD 
LPVNKAYETA LRGHSVNIIN RSKWLNAVSA NLTSEQAMKV RELDFVADVV MIDPGFYIAK
TQPIEKAQMA PVMSQVQANA FLKENITAKD VTIGVIDAGF YGADSSLSLS QVFSNNRVLG
IRDYVKPGRP GDLLFSTAES FSDMHGTEVL AAIAGIDHQD QVQYGMATNA KFYLARTDYS
MREYRGEEDN WIAAMEWMDS LGVRLINTSL GYAKGFSDPR ENYQPAQMDG KTSAISKAAQ
IASDKKGIMI IVSAGNEGDD KSWGIVSAPA DAKGVLSVGA TNGKLWNRIG YSSTGPEFLS
YVKPNVSCFS LYGTSLSAPV ITGFAACLLQ ANPQLSNKEL ISLIEKSSHL YPYGNNFVGY
GVPQASRALA LAKAPYLPNN SKLITAKGRS CEVDVTSQDA IVAIYRKKNE KDVIAQQVAK
VQNGKVSLKR QNNERFTTID LRDYVVEVEW N