Gene Dfer_2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2867 
Symbol 
ID8226440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3533318 
End bp3534553 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content51% 
IMG OID644930697 
Productnucleoside recognition domain protein 
Protein accessionYP_003087247 
Protein GI255036626 
COG category[R] General function prediction only 
COG ID[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0752629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTAA ATTATATTTT CGTTTCGTTT TTCGTCATTG CCTTCCTGAT TGCGCTTCTG 
CAATTCGTTT TCACGGGCGA CGTCCAAACT TTCAAGGCCA TTACTGAGGG AATGCTGGAA
ATGGCCAAAG TGGCTGTGAT GGACATCGCA TTGCCGCTCA CAGGCGTAAT GGCGTTCTTC
CTCGGCATTC TGAATGTGGG AGAAAAGGCC GGGATCATCC ACGTCATTGC GCGGTTTATC
GGGCCGTTTT TTAACAAACT TTTTCCCGAA GTTCCCAAAG ATCACCCGGC AAACGGCCAG
ATGATCATGA ACTTCTCCGC CAATTTCCTC GGCCTCGACA ATGCGGCCAC GCCCTTCGGT
TTGAAGGCGA TGCAAAGCCT GCAAGAACTC AATCCCAGCA AGGATACCGC TTCCAATGCG
CAAATCATGT TCCTCGTACT GCACACGTCA GGTTTACAGA TTATCCCGCT GTCCATCATC
GCCCAGCGCG CCATTCTGGG TGCGCAGAGC CCTTCGGACG TTTTTATCCC GTGCGTAGTG
GGTACTTACG TTACCACGGT TGTGAGTATG ATCATTACGG CTATCTGGCA GAAAATCAAT
CTGTTCAACA GAACGGTCAT GCTGGGCCTG GGCAGCGTTA CCGCCATGAT CGCGCTGATA
TTATGGTACT TATCGGGCTT GCCCAAAGAG CAGATCGAAA CGGTTTCAAT TCTGGCGGGT
AACTCGGTGC TGCTGGCTGT GGTGGCGGGT TTTCTTGGCT GGGGCATGTT TAAGAAAGTA
AATGTGTTCG AAGCATTTAT CGAAGGTGCG AAAGGCGGTT TCACCACATC GGTGACGATT
ATTCCGTATC TGGTAGGCCT GCTTGTGGCC ATCAGCGCAT TCAGAAGCTG CGGAGCGATG
GATTATATGA TCGACGGTTT GAAATGGGCC TTTTCATTAA CAGGCTTTAA TACCGATTTC
ACCGACGCAT TGCCCGTGGC GCTTATGAAA CCCCTCAGCG GGAGCGGTGC GCGCGCATTG
ATGATCGACG CCATGAAGGA GTTCGGTCCC GATTCGTTCA TCGGCAGGCT GGTGTGCATC
TTCCAGGGTT CGGCAGACAC CACTTTATAT ATTGTTGCAT TGTACTTCGG CTCAGTGGGC
ATCAAGAACA CCCGCTATGC CATCGTAGCT GGTCTGATCG CCGATTTTGT CGGTGTAATT
GCCGGAATAT GGCTCGGTTA CCTGTTTTTC CACTGA
 
Protein sequence
MALNYIFVSF FVIAFLIALL QFVFTGDVQT FKAITEGMLE MAKVAVMDIA LPLTGVMAFF 
LGILNVGEKA GIIHVIARFI GPFFNKLFPE VPKDHPANGQ MIMNFSANFL GLDNAATPFG
LKAMQSLQEL NPSKDTASNA QIMFLVLHTS GLQIIPLSII AQRAILGAQS PSDVFIPCVV
GTYVTTVVSM IITAIWQKIN LFNRTVMLGL GSVTAMIALI LWYLSGLPKE QIETVSILAG
NSVLLAVVAG FLGWGMFKKV NVFEAFIEGA KGGFTTSVTI IPYLVGLLVA ISAFRSCGAM
DYMIDGLKWA FSLTGFNTDF TDALPVALMK PLSGSGARAL MIDAMKEFGP DSFIGRLVCI
FQGSADTTLY IVALYFGSVG IKNTRYAIVA GLIADFVGVI AGIWLGYLFF H