| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2866 |
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| Symbol | |
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| ID | 8226439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3531708 |
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| End bp | 3533150 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644930696 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003087246 |
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| Protein GI | 255036625 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0685652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTC CTGAAACCGT CCTGGCGCAA CAAAATGTAA CTCAGCCTGC TAACACCTAT
TCGCTGGAAG ATTGCATCCG GATCGCCCTG GAAACGAACC CGCAGGTGAA GCAGTCGGAG
ATCACCGTGC AAACGAACGG CAACACTTAT GAGCAATCCA AATGGGAGCG GTGGCCGAGC
ATCAGTTTCA GCGCCGGTCA GGGCTTCCGG TCGGGTCGTA ACATTGATCC CTTTACCAAC
CAGTTCGTGC AGCAGAATGT GAGCTCCAAT AACTACCAGC TCGGCGGGCA AGTGACGCTT
TTCAGCGGTT TTCAGATCAG CAACAATATC AAATTCAATA ATGCCAACTA TCAGGCCAGC
GCCAAGGACC TCGAAGCGAC CCGCAACGAC ATTATGCTCA ACGTCGCATT GTCCTATTTG
CAGGTCGTAA CCAACGAGGA GCTCATTATA GTGGCGCAGC GGCAGGTGGA TGCTTCCCAA
TTGCAGGTCG ACCGCACCGC TAAGCTGGTG GAAGCAGGTA CATTGGCGGA AAGCAACCTG
CTCGACCTGA AATCACAGTT GGCAAACGAC GAGCTCACAC TCGTAAATGC CCAAAACAAC
CTCGAAACGG CCAAGCTGAA CTTGAAGCAA TTCATGAACA TGCCGGGCAG TGAGGTGATC
AATGTGGTGA AGATTCCGGT AAAAGATCCC ACATTGCAGG CCTATGACGC TACCATTCAG
GAAATTTATG AAACAGCCCT GAACAATCTG CCCCAAATGA AAGCCGCCAA CATGCGCATT
GAGGCTTCCA AAATCAATGT AGACCTGGCC CGGGGCGCGA GAATGCCGAC GCTGACTTTG
AATGGCGGTA TCTACACAGC CTATTCCAGC GCGGCGCCCA AAGAGCGGTT TGTAGGCGAC
GGAACGGGTA GTACGGTGAT CGAGGTTCCT TCGCAAACGG ACTATATTCT GGTGGACGAC
AAGCCCGTGC CCATTATTCA GCGTGTGTCC ACGCCCAACG GTTCGTTGCA GAGTTTCCGC
TATTTCAACC AGCTCGACTT CAACCGTAAC TCGGCCATTA ACCTGAACCT GAACATCCCG
ATTTTCAACA ATTTCAGGGT AAAATATAAT GTGGCCAACG CCCGGTTGCA GCAAAAAACA
TACGAATACC AGGCGCAGCA GGTGCAGCTC ACCATCCGCA AGAATGTGGA ACAGGCTTAC
ATCGACATGA CCAACGCGGC GAAACGTTAC TCGGCCACTG CCAATCAGGT ACGGGCATTG
CAGGAAACAT TCCGTGTGGC GCAGGTCCGG TTTGATGTGG GCGCAATTAA CTCTGTGGAG
TATAATATTG CCAAAGCCAA CCTCGACCGG GCGAACGGTA ACCTCGTTCA AACCAAGTAT
GACTACGTTT TCAGGACTAA AATCCTGGAT TTCTACATGA ACCGCCCGCT CTCCGATTTC
TAG
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| Protein sequence | MTVPETVLAQ QNVTQPANTY SLEDCIRIAL ETNPQVKQSE ITVQTNGNTY EQSKWERWPS
ISFSAGQGFR SGRNIDPFTN QFVQQNVSSN NYQLGGQVTL FSGFQISNNI KFNNANYQAS
AKDLEATRND IMLNVALSYL QVVTNEELII VAQRQVDASQ LQVDRTAKLV EAGTLAESNL
LDLKSQLAND ELTLVNAQNN LETAKLNLKQ FMNMPGSEVI NVVKIPVKDP TLQAYDATIQ
EIYETALNNL PQMKAANMRI EASKINVDLA RGARMPTLTL NGGIYTAYSS AAPKERFVGD
GTGSTVIEVP SQTDYILVDD KPVPIIQRVS TPNGSLQSFR YFNQLDFNRN SAINLNLNIP
IFNNFRVKYN VANARLQQKT YEYQAQQVQL TIRKNVEQAY IDMTNAAKRY SATANQVRAL
QETFRVAQVR FDVGAINSVE YNIAKANLDR ANGNLVQTKY DYVFRTKILD FYMNRPLSDF
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