| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2865 |
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| Symbol | |
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| ID | 8226438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3530223 |
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| End bp | 3531659 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644930695 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003087245 |
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| Protein GI | 255036624 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0716848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTA AATCTTCGAA ACAGATCTGG TGGATAACGG GAGGTGTCGT AGTGCTGCTT
TTCGGTGGAT TGTTTGGGGC AAAACAGGCC GGGCTTATCG GCAAACCTAA AACGACCGAG
GTGGAATACA CGACCGTCAA AAAATCGGAT ATCATCGAAC GGGTGAGCGC GTCGGGAAAG
GTGCAGCCGG AGGTGGAAGT GAAGCTCAGC CCCGACGTTT CCGGCGAAAT CATCGCCCTG
AATGTGGCTG AGGGTGACTC GGTCGTGAAA GGACAGTTGC TGCTGAAAAT CCGCCCTGAT
AACTATGAAT CGCTGATGGC CCGAGCCCAG GCCGCCGTTA ATTCGAGCAA AGCCAATTAT
GAACAAACCA AGGCGATGGT TGCACAGGCG GAGGCGCGGC TCGTGCAGGC GAAGGCCAAT
TACGAGCGTA ACAAAAAACT TTTCTCCGAT AAAGTGATCT CATCTGCTGA CTTCGAGCAA
TTTGCATCGA CGTTTGGCGT AGCCCAGCAG GATGTAGAAT CTGCAAAAGC CAATGTGGCA
GCGGCGCTTT ACAATATCAA GAGCGCCGAA GCAAGCTTGC GCGATGCGGC AGAAAACTTA
CGCAAAACGA GCATTTTCGC GCCGGTAAGC GGCATCGTTT CGCTGCTGAA TGTAGAAGCC
GGCGAGCGCG TGGTGGGAAC TTCGCAAATG GCGGGTACCG AAATGATGCG CATCGCCAAC
CTGGCCGATA TGGAGGTTCG CGTGAATGTA AACGAGAATG ATATTGTGCG CGTTTCGATC
GGCGATACGG CCGAGATCGA CGTGGATGCT TACAGCTCGT CGGGGCGGAA ATTCAAAGGT
GTGGTGAAGG AAATCGCCAA TACGGCGGCC GGTTTGGCAT CGCTGTCGTC TACATCCACA
TCGGCCGCCA ATACGTCGGC CGACGCCGTG ACGGAATTTC AGGTAAAAGT GAAAATCCTG
AACGAATCGT TCGCGGACCT GATGAACGCG CGTTCCAAAA AGTCTTATCC ATTCAAACCG
GGCATGACCG CCTCGGTTGA AATTATCACA GAGCGCAAAA ATGGCGTAGT TTCCGTGCCG
ATCGCCGCCG TAACAACGCG TGGCGGCACG CAGCAGGCCA TTCCGGGTTC GGGTGACGGT
ACCGAAAACA ATGCACCGCC AGCCAGCGAT GACGAGAACA AGAAGCCTAA GAAAGAAGAG
GCCATTAAAG AAGTCGTTTT CATGGATGTA AACGGCAAAG CGGAAATGAA GGAAGTGAAA
ACGGGGATCA GCGATTTTGA GAACATTGAA ATACTTTCGG GCCTTAAACC GGGCGACCGA
ATTATCTCCG GACCATACAT TGCGGTGTCC AAAAACCTCA ACAACGGTGA CCTGGTAGAG
AAAAAGAAGG AAGAACCGAA AAAAGATGGA AAAAAATCAA ATGAAAACCC GAACTGA
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| Protein sequence | MARKSSKQIW WITGGVVVLL FGGLFGAKQA GLIGKPKTTE VEYTTVKKSD IIERVSASGK
VQPEVEVKLS PDVSGEIIAL NVAEGDSVVK GQLLLKIRPD NYESLMARAQ AAVNSSKANY
EQTKAMVAQA EARLVQAKAN YERNKKLFSD KVISSADFEQ FASTFGVAQQ DVESAKANVA
AALYNIKSAE ASLRDAAENL RKTSIFAPVS GIVSLLNVEA GERVVGTSQM AGTEMMRIAN
LADMEVRVNV NENDIVRVSI GDTAEIDVDA YSSSGRKFKG VVKEIANTAA GLASLSSTST
SAANTSADAV TEFQVKVKIL NESFADLMNA RSKKSYPFKP GMTASVEIIT ERKNGVVSVP
IAAVTTRGGT QQAIPGSGDG TENNAPPASD DENKKPKKEE AIKEVVFMDV NGKAEMKEVK
TGISDFENIE ILSGLKPGDR IISGPYIAVS KNLNNGDLVE KKKEEPKKDG KKSNENPN
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