| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2853 |
|---|
| Symbol | |
|---|
| ID | 8226426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3519456 |
|---|
| End bp | 3520706 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644930683 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase 2 |
|---|
| Protein accession | YP_003087233 |
|---|
| Protein GI | 255036612 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0985391 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.179759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAG TAGTTGTTAC TGGCCTGGGG GTTATATCCC CGCTGGGGAA TTCTGTGGAG
GAGTTCTGGC AAAATATTGT AGATGGTAAA AGCGGTGCTG CTACCATTAC GAAAATGGAT
GTTTCCAAAT TCAAAACCCA GTTCGGCTGC GAAGTGAAAA ACTTCCATCC GGAAGACTAT
ATTGAGAAAA AGGAAATCAA GAAATACGAC CTGCACACGC AATACGCGAT CGCGGCTTCG
GACACGGCGA TCAAAGACGC GGGTCTTGAT TTTGAAAATA TCGACGTGAA GGACCGCTAC
GATATGGGCG TTATCTGGGC TACCGGAAAC GGTGGTATGG GCACGTTCGA GGACCAGCTG
CTGGAATTCC ACGCTTCGGG CGGTATACCG CGTTTTAACC CGTTCTTTAT TCCCAAAATG
ATCGTGGACA TTGCTGCGGG CGTGATTTCG ATCCGCCACA AGCTGCATGG TCCCAATTAC
TGTACGGTTT CGGCCTGTGC ATCGTCCAAC ACGGCGCTCA TCAGCGCATT CGACACCATC
CGCATGGGTA AAGCCAAGCT AATGGTGGCG GGCGGCTCCG AGGCGGCCAT CATTTACTCC
GCATTGGGCG GTTTCAGCGC GGCGCAGGCA CTTTCCAAAC GCAACGACGA TCCCGCAACC
GCTTCCAGGC CTTTCGACAA GGACCGCGAC GGCTTTGTGA TGGGTGAAGG CGCGGCGGCA
TTGATCCTCG AAGATCTGGA ATATGCCAAA GCGAGAGGCG CAAAAATTTA TGCCGAAATC
GTGGGCGGCG GTATGGCAGC GGACGCCTAC CACCTTACCG GCACACCGCC GGACGGAATG
GGCGCGGCGC TCGGCATGAC CAAAGCATTG AACGAAGCGG GCATCACGCC GGACAAAATC
GACTACGTGA ATGCGCACGC CACCTCTACC GGCCTGGGCG ACATGAGTGA GTTGCAAGGC
ATGAAAACGG TGTTCGGCGA CCATCCGGTA GCCATCAGCG CCACCAAATC CATGACCGGC
CATTTGCTGG GCGCCGCAGG AGCGCTGGAA AGCATCGTTT GCGCATTGGC AGTGAAACAC
GACATCATTC CAGGCACGAT CAACACCGAA AACCTCGACG AGGCCATTCC CGAAGGCATG
AATATCGTTT TAGGAAAATC GCTGAACCAG ACGGTGAACT ACGCGCTCAA CAACACGTTC
GGTTTCGGAG GGCACACGGC GACCTCTATT TTCAAGAAAT ACACAGAGTA G
|
|---|
| Protein sequence | MKRVVVTGLG VISPLGNSVE EFWQNIVDGK SGAATITKMD VSKFKTQFGC EVKNFHPEDY
IEKKEIKKYD LHTQYAIAAS DTAIKDAGLD FENIDVKDRY DMGVIWATGN GGMGTFEDQL
LEFHASGGIP RFNPFFIPKM IVDIAAGVIS IRHKLHGPNY CTVSACASSN TALISAFDTI
RMGKAKLMVA GGSEAAIIYS ALGGFSAAQA LSKRNDDPAT ASRPFDKDRD GFVMGEGAAA
LILEDLEYAK ARGAKIYAEI VGGGMAADAY HLTGTPPDGM GAALGMTKAL NEAGITPDKI
DYVNAHATST GLGDMSELQG MKTVFGDHPV AISATKSMTG HLLGAAGALE SIVCALAVKH
DIIPGTINTE NLDEAIPEGM NIVLGKSLNQ TVNYALNNTF GFGGHTATSI FKKYTE
|
|---|
| |