Gene Dfer_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2850 
Symbol 
ID8226423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3516953 
End bp3517636 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content52% 
IMG OID644930680 
ProductMethyltransferase type 12 
Protein accessionYP_003087230 
Protein GI255036609 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.852328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.15922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATA ATTACGACCG TATCGCCACG AATTACGACA GGCTCAGCAG GCTGGTGTTC 
GGAAAATCCA TTGTCCGTGC ACAGCGGTCG TTGCTGCCGG CCATTGCACC GCGCTCGCGG
ATACTGATCG TGGGCGGCGG CACCGGCTGG ATTCTGGAAG AGATATCCCG CCTGCATGCT
TCCGGCCTGG TGATCGATTA CGTCGAAATT TCATCCAATA TGCTCGACCT CGCCCGCGAA
AGAGACTGCA AGGCGAACCG GGTCGCATTT ATTCACATGG CCATTGAAAA TTATGCCGCG
CCTGCACCGT ATGACGTGAT TATGACGCCG TTCCTGTTCG ACAATTTCAG TCGCCCGCGT
GCGCAGGAGG TTTTTGATAA ACTAAATTAT TACCTCAAAC CGGGCGGACA ATGGCTCTTC
ACCGATTTTC ATATCGACAA AGGCACTAAC CGACTGTGGC AAAAGGCATT GCTGCGATCG
ATGTACATTT TCTTCCGGAA CATCAGCCGC GTAGAAGCGG ACCAGCTGCC AGATATGCAG
GCGCATTTTG TTCAAAACGG CTACCAACTC ACTTTTGAAA GTTATCATTT CGGCCGTTTC
ATCCGCTCGG CGGCTTACCG GAAATCAGGC GACGGCGGTT CGGCGGCGCC CGAAAATAAA
CCGTTCGTTA AAAATCACGA TTGA
 
Protein sequence
MLNNYDRIAT NYDRLSRLVF GKSIVRAQRS LLPAIAPRSR ILIVGGGTGW ILEEISRLHA 
SGLVIDYVEI SSNMLDLARE RDCKANRVAF IHMAIENYAA PAPYDVIMTP FLFDNFSRPR
AQEVFDKLNY YLKPGGQWLF TDFHIDKGTN RLWQKALLRS MYIFFRNISR VEADQLPDMQ
AHFVQNGYQL TFESYHFGRF IRSAAYRKSG DGGSAAPENK PFVKNHD