Gene Dfer_2849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2849 
Symbol 
ID8226422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3516028 
End bp3516951 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content53% 
IMG OID644930679 
Producthypothetical protein 
Protein accessionYP_003087229 
Protein GI255036608 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.168855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAACA GGATTATCGC ATTTGTATTT TTTGCCAACT ACTTCGTCGG ACTGCTGGCT 
GTTGCGCTGT CCGTTGAAAC TGGCTTCCAG CTGAATCTGC CGCTCAACTC GCCGGTTTAC
TACGTTCTTG TTTTCTGCGC CACCGTTTTT TATTACACGA TCGCCTATTC CGGGCCTGTG
GCGCCCAAAG TGTCGGCCAA CCCGCGAACC GAATGGTACC GTCTCCATCA CCGTTTTACG
AGGATTAGCC AGGTGGTGCT GTTCAGCATT TGCGCGGTCG CCGGCGGCTG GTACCTGATC
GACAATTTTC ACGCGGTGCT GCATTTGCCG CTGCATTACT CGCTGATATT GTCGGTTGTG
CCGCTTGCCG CCGTGCTGTA CTACGGGTTG CTCCCGAAAT CGATCATTTC GCTGAACCTC
CGCCGGACAG GGTGGCTGAA AGCATTTGTG ATCGGCTTTG TGTGGGCGGG GTGTGTTAAT
CTGTTCCCGA TGGCGGCGCT GCGGATCGAG CAGGGCATTA CCGTTGGCGA GCCTTTGCTG
ATGCTATGGC TTTTTACCAA AAACTGGATG TTTTGCACGG TGAATGCGAT TATGTTCGAT
ATGAAGGACT ATGAGGACGA TGCGAATATC GAATTGAAGA CTTTTGCCGT GCGAATGGGC
CTGCGCAATA CGATTTACTA TGTGCTGGTG CCGCTCCTGC TCGTCGGGCT ACTTTCGTTC
CTCACTTTCG CGATTTTCCG CGGCTTCGGC TGGCCCACGG TGCTGTTCAA TATCGTGCCG
TTTGTGTGCC TGCTCATCGT CGCATTCTCG CTGCAAAAGC GGCAGAGTAT TTTGTTCTAT
CTCATCGTGA TCGACGGCTT GCTGCTCGTG AAGGCACTTT GTGGGATAGC CGGCAGCTTC
TTTGCGCACC AGAACCTTTC TTGA
 
Protein sequence
MLNRIIAFVF FANYFVGLLA VALSVETGFQ LNLPLNSPVY YVLVFCATVF YYTIAYSGPV 
APKVSANPRT EWYRLHHRFT RISQVVLFSI CAVAGGWYLI DNFHAVLHLP LHYSLILSVV
PLAAVLYYGL LPKSIISLNL RRTGWLKAFV IGFVWAGCVN LFPMAALRIE QGITVGEPLL
MLWLFTKNWM FCTVNAIMFD MKDYEDDANI ELKTFAVRMG LRNTIYYVLV PLLLVGLLSF
LTFAIFRGFG WPTVLFNIVP FVCLLIVAFS LQKRQSILFY LIVIDGLLLV KALCGIAGSF
FAHQNLS